Gene : Bradi2g39500 B. distachyon v3.1
Defline:  (1 of 57) PF00892 - EamA-like transporter family (EamA) Genomic Order:  4735
Name:  ? Bradi2g39500 Secondary Identifier:  ? PAC:32778646
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g39500 0.5kb upstream 0.5kb upstream 4658 true Bd2: 39387364-39392021 Brachypodium distachyon
Bradi2g39500 0.5kb upstream 0.5kb upstream 500 false Bd2: 39391522-39392021 Brachypodium distachyon
Bradi2g39500 0.5kb downstream 0.5kb downstream 4658 true Bd2: 39386864-39391521 Brachypodium distachyon
Bradi2g39500 0.5kb downstream 0.5kb downstream 500 false Bd2: 39386864-39387363 Brachypodium distachyon
Bradi2g39500 1.0kb upstream 1.0kb upstream 5158 true Bd2: 39387364-39392521 Brachypodium distachyon
Bradi2g39500 1.0kb upstream 1.0kb upstream 1000 false Bd2: 39391522-39392521 Brachypodium distachyon
Bradi2g39500 1.0kb downstream 1.0kb downstream 5158 true Bd2: 39386364-39391521 Brachypodium distachyon
Bradi2g39500 1.0kb downstream 1.0kb downstream 1000 false Bd2: 39386364-39387363 Brachypodium distachyon
Bradi2g39500 2.0kb upstream 2.0kb upstream 6158 true Bd2: 39387364-39393521 Brachypodium distachyon
Bradi2g39500 2.0kb upstream 2.0kb upstream 2000 false Bd2: 39391522-39393521 Brachypodium distachyon
Bradi2g39500 2.0kb downstream 2.0kb downstream 6158 true Bd2: 39385364-39391521 Brachypodium distachyon
Bradi2g39500 2.0kb downstream 2.0kb downstream 2000 false Bd2: 39385364-39387363 Brachypodium distachyon
Bradi2g39500 5.0kb upstream 5.0kb upstream 9158 true Bd2: 39387364-39396521 Brachypodium distachyon
Bradi2g39500 5.0kb upstream 5.0kb upstream 5000 false Bd2: 39391522-39396521 Brachypodium distachyon
Bradi2g39500 5.0kb downstream 5.0kb downstream 9158 true Bd2: 39382364-39391521 Brachypodium distachyon
Bradi2g39500 5.0kb downstream 5.0kb downstream 5000 false Bd2: 39382364-39387363 Brachypodium distachyon
Bradi2g39500 10.0kb upstream 10.0kb upstream 14158 true Bd2: 39387364-39401521 Brachypodium distachyon
Bradi2g39500 10.0kb upstream 10.0kb upstream 10000 false Bd2: 39391522-39401521 Brachypodium distachyon
Bradi2g39500 10.0kb downstream 10.0kb downstream 14158 true Bd2: 39377364-39391521 Brachypodium distachyon
Bradi2g39500 10.0kb downstream 10.0kb downstream 10000 false Bd2: 39377364-39387363 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026670 5273 Angiosperm View MSA
124586908 5269 Grass View MSA
121296466 5274 Embryophyte View MSA
123334621 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  

0 Strain