Gene : Bradi4g41717 B. distachyon v3.1
Defline:  (1 of 1) PTHR17972 - NUCLEOLAR RNA-ASSOCIATED PROTEIN Genomic Order:  5368
Name:  ? Bradi4g41717 Secondary Identifier:  ? PAC:32785780
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g41717 0.5kb upstream 0.5kb upstream 8819 true Bd4: 45673859-45682677 Brachypodium distachyon
Bradi4g41717 0.5kb upstream 0.5kb upstream 500 false Bd4: 45682178-45682677 Brachypodium distachyon
Bradi4g41717 0.5kb downstream 0.5kb downstream 8819 true Bd4: 45673359-45682177 Brachypodium distachyon
Bradi4g41717 0.5kb downstream 0.5kb downstream 500 false Bd4: 45673359-45673858 Brachypodium distachyon
Bradi4g41717 1.0kb upstream 1.0kb upstream 9319 true Bd4: 45673859-45683177 Brachypodium distachyon
Bradi4g41717 1.0kb upstream 1.0kb upstream 1000 false Bd4: 45682178-45683177 Brachypodium distachyon
Bradi4g41717 1.0kb downstream 1.0kb downstream 9319 true Bd4: 45672859-45682177 Brachypodium distachyon
Bradi4g41717 1.0kb downstream 1.0kb downstream 1000 false Bd4: 45672859-45673858 Brachypodium distachyon
Bradi4g41717 2.0kb upstream 2.0kb upstream 10319 true Bd4: 45673859-45684177 Brachypodium distachyon
Bradi4g41717 2.0kb upstream 2.0kb upstream 2000 false Bd4: 45682178-45684177 Brachypodium distachyon
Bradi4g41717 2.0kb downstream 2.0kb downstream 10319 true Bd4: 45671859-45682177 Brachypodium distachyon
Bradi4g41717 2.0kb downstream 2.0kb downstream 2000 false Bd4: 45671859-45673858 Brachypodium distachyon
Bradi4g41717 5.0kb upstream 5.0kb upstream 13319 true Bd4: 45673859-45687177 Brachypodium distachyon
Bradi4g41717 5.0kb upstream 5.0kb upstream 5000 false Bd4: 45682178-45687177 Brachypodium distachyon
Bradi4g41717 5.0kb downstream 5.0kb downstream 13319 true Bd4: 45668859-45682177 Brachypodium distachyon
Bradi4g41717 5.0kb downstream 5.0kb downstream 5000 false Bd4: 45668859-45673858 Brachypodium distachyon
Bradi4g41717 10.0kb upstream 10.0kb upstream 18319 true Bd4: 45673859-45692177 Brachypodium distachyon
Bradi4g41717 10.0kb upstream 10.0kb upstream 10000 false Bd4: 45682178-45692177 Brachypodium distachyon
Bradi4g41717 10.0kb downstream 10.0kb downstream 18319 true Bd4: 45663859-45682177 Brachypodium distachyon
Bradi4g41717 10.0kb downstream 10.0kb downstream 10000 false Bd4: 45663859-45673858 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572210 5269 Grass View MSA
122046493 5273 Angiosperm View MSA
121346121 5274 Embryophyte View MSA
123425222 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.647        
cufflinks 1.267       High
cufflinks 0.866        
cufflinks 1.095        
cufflinks 0.128       Low
cufflinks 1.1        
cufflinks 0.93        
cufflinks 0.779        
cufflinks 0.866        
cufflinks 0.375        
cufflinks 0.222        
cufflinks 0.731        
cufflinks 0.155       Low
cufflinks 0.136       Low
cufflinks 0.222        
cufflinks 1.031        
cufflinks 0.602        
cufflinks 1.958       High
cufflinks 0.411        
cufflinks 0.051     Low Low
cufflinks 0.562        
cufflinks 0.668        
cufflinks 0.638        
cufflinks 0.683        
cufflinks 1.0        
cufflinks 0.501        
cufflinks 0.137       Low
cufflinks 0.376        
cufflinks 0.444        
cufflinks 0.948        

0 Strain