Gene : Bradi2g40046 B. distachyon v3.1
Defline:  (1 of 1) PTHR10774//PTHR10774:SF95 - EXTENDED SYNAPTOTAGMIN-RELATED Genomic Order:  4799
Name:  ? Bradi2g40046 Secondary Identifier:  ? PAC:32778776
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g40046 0.5kb upstream 0.5kb upstream 4421 true Bd2: 39755159-39759579 Brachypodium distachyon
Bradi2g40046 0.5kb upstream 0.5kb upstream 500 false Bd2: 39755159-39755658 Brachypodium distachyon
Bradi2g40046 0.5kb downstream 0.5kb downstream 4421 true Bd2: 39755659-39760079 Brachypodium distachyon
Bradi2g40046 0.5kb downstream 0.5kb downstream 500 false Bd2: 39759580-39760079 Brachypodium distachyon
Bradi2g40046 1.0kb upstream 1.0kb upstream 4921 true Bd2: 39754659-39759579 Brachypodium distachyon
Bradi2g40046 1.0kb upstream 1.0kb upstream 1000 false Bd2: 39754659-39755658 Brachypodium distachyon
Bradi2g40046 1.0kb downstream 1.0kb downstream 4921 true Bd2: 39755659-39760579 Brachypodium distachyon
Bradi2g40046 1.0kb downstream 1.0kb downstream 1000 false Bd2: 39759580-39760579 Brachypodium distachyon
Bradi2g40046 2.0kb upstream 2.0kb upstream 5921 true Bd2: 39753659-39759579 Brachypodium distachyon
Bradi2g40046 2.0kb upstream 2.0kb upstream 2000 false Bd2: 39753659-39755658 Brachypodium distachyon
Bradi2g40046 2.0kb downstream 2.0kb downstream 5921 true Bd2: 39755659-39761579 Brachypodium distachyon
Bradi2g40046 2.0kb downstream 2.0kb downstream 2000 false Bd2: 39759580-39761579 Brachypodium distachyon
Bradi2g40046 5.0kb upstream 5.0kb upstream 8921 true Bd2: 39750659-39759579 Brachypodium distachyon
Bradi2g40046 5.0kb upstream 5.0kb upstream 5000 false Bd2: 39750659-39755658 Brachypodium distachyon
Bradi2g40046 5.0kb downstream 5.0kb downstream 8921 true Bd2: 39755659-39764579 Brachypodium distachyon
Bradi2g40046 5.0kb downstream 5.0kb downstream 5000 false Bd2: 39759580-39764579 Brachypodium distachyon
Bradi2g40046 10.0kb upstream 10.0kb upstream 13921 true Bd2: 39745659-39759579 Brachypodium distachyon
Bradi2g40046 10.0kb upstream 10.0kb upstream 10000 false Bd2: 39745659-39755658 Brachypodium distachyon
Bradi2g40046 10.0kb downstream 10.0kb downstream 13921 true Bd2: 39755659-39769579 Brachypodium distachyon
Bradi2g40046 10.0kb downstream 10.0kb downstream 10000 false Bd2: 39759580-39769579 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124581665 5269 Grass View MSA
122042334 5273 Angiosperm View MSA
121345597 5274 Embryophyte View MSA
123428781 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.24        
cufflinks 1.58        
cufflinks 1.353        
cufflinks 1.226        
cufflinks 0.784       Low
cufflinks 1.217        
cufflinks 1.419        
cufflinks 1.315        
cufflinks 1.376        
cufflinks 1.025        
cufflinks 1.719        
cufflinks 1.337        
cufflinks 0.998        
cufflinks 1.034        
cufflinks 0.953        
cufflinks 1.832        
cufflinks 1.536        
cufflinks 3.113       High
cufflinks 1.935        
cufflinks 0.496       Low
cufflinks 2.178       High
cufflinks 1.337        
cufflinks 1.201        
cufflinks 1.465        
cufflinks 1.288        
cufflinks 1.687        
cufflinks 1.205        
cufflinks 1.203        
cufflinks 1.222        
cufflinks 1.641        

0 Strain