Gene : Bradi2g40170 B. distachyon v3.1
Defline:  (1 of 1) K02257 - protoheme IX farnesyltransferase (COX10) Genomic Order:  4815
Name:  ? Bradi2g40170 Secondary Identifier:  ? PAC:32777888
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g40170 0.5kb upstream 0.5kb upstream 4990 true Bd2: 39897492-39902481 Brachypodium distachyon
Bradi2g40170 0.5kb upstream 0.5kb upstream 500 false Bd2: 39901982-39902481 Brachypodium distachyon
Bradi2g40170 0.5kb downstream 0.5kb downstream 4990 true Bd2: 39896992-39901981 Brachypodium distachyon
Bradi2g40170 0.5kb downstream 0.5kb downstream 500 false Bd2: 39896992-39897491 Brachypodium distachyon
Bradi2g40170 1.0kb upstream 1.0kb upstream 5490 true Bd2: 39897492-39902981 Brachypodium distachyon
Bradi2g40170 1.0kb upstream 1.0kb upstream 1000 false Bd2: 39901982-39902981 Brachypodium distachyon
Bradi2g40170 1.0kb downstream 1.0kb downstream 5490 true Bd2: 39896492-39901981 Brachypodium distachyon
Bradi2g40170 1.0kb downstream 1.0kb downstream 1000 false Bd2: 39896492-39897491 Brachypodium distachyon
Bradi2g40170 2.0kb upstream 2.0kb upstream 6490 true Bd2: 39897492-39903981 Brachypodium distachyon
Bradi2g40170 2.0kb upstream 2.0kb upstream 2000 false Bd2: 39901982-39903981 Brachypodium distachyon
Bradi2g40170 2.0kb downstream 2.0kb downstream 6490 true Bd2: 39895492-39901981 Brachypodium distachyon
Bradi2g40170 2.0kb downstream 2.0kb downstream 2000 false Bd2: 39895492-39897491 Brachypodium distachyon
Bradi2g40170 5.0kb upstream 5.0kb upstream 9490 true Bd2: 39897492-39906981 Brachypodium distachyon
Bradi2g40170 5.0kb upstream 5.0kb upstream 5000 false Bd2: 39901982-39906981 Brachypodium distachyon
Bradi2g40170 5.0kb downstream 5.0kb downstream 9490 true Bd2: 39892492-39901981 Brachypodium distachyon
Bradi2g40170 5.0kb downstream 5.0kb downstream 5000 false Bd2: 39892492-39897491 Brachypodium distachyon
Bradi2g40170 10.0kb upstream 10.0kb upstream 14490 true Bd2: 39897492-39911981 Brachypodium distachyon
Bradi2g40170 10.0kb upstream 10.0kb upstream 10000 false Bd2: 39901982-39911981 Brachypodium distachyon
Bradi2g40170 10.0kb downstream 10.0kb downstream 14490 true Bd2: 39887492-39901981 Brachypodium distachyon
Bradi2g40170 10.0kb downstream 10.0kb downstream 10000 false Bd2: 39887492-39897491 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575772 5269 Grass View MSA
122046986 5273 Angiosperm View MSA
121346504 5274 Embryophyte View MSA
123428600 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.516       Low
cufflinks 2.529        
cufflinks 2.638        
cufflinks 2.168        
cufflinks 2.18        
cufflinks 2.332        
cufflinks 2.604        
cufflinks 2.564        
cufflinks 2.427        
cufflinks 1.797        
cufflinks 1.885        
cufflinks 2.119        
cufflinks 1.507       Low
cufflinks 1.591        
cufflinks 1.613        
cufflinks 2.716        
cufflinks 2.633        
cufflinks 5.034       High
cufflinks 3.346       High
cufflinks 1.783        
cufflinks 3.288       High
cufflinks 2.22        
cufflinks 2.435        
cufflinks 2.413        
cufflinks 2.098        
cufflinks 2.175        
cufflinks 1.831        
cufflinks 2.105        
cufflinks 2.4        
cufflinks 2.6        

0 Strain