Gene : Bradi2g40600 B. distachyon v3.1
Defline:  (1 of 1) K02212 - DNA replication licensing factor MCM4 (MCM4, CDC54) Genomic Order:  4849
Name:  ? Bradi2g40600 Secondary Identifier:  ? PAC:32772217
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g40600 0.5kb upstream 0.5kb upstream 5594 true Bd2: 40647626-40653219 Brachypodium distachyon
Bradi2g40600 0.5kb upstream 0.5kb upstream 500 false Bd2: 40647626-40648125 Brachypodium distachyon
Bradi2g40600 0.5kb downstream 0.5kb downstream 5594 true Bd2: 40648126-40653719 Brachypodium distachyon
Bradi2g40600 0.5kb downstream 0.5kb downstream 500 false Bd2: 40653220-40653719 Brachypodium distachyon
Bradi2g40600 1.0kb upstream 1.0kb upstream 6094 true Bd2: 40647126-40653219 Brachypodium distachyon
Bradi2g40600 1.0kb upstream 1.0kb upstream 1000 false Bd2: 40647126-40648125 Brachypodium distachyon
Bradi2g40600 1.0kb downstream 1.0kb downstream 6094 true Bd2: 40648126-40654219 Brachypodium distachyon
Bradi2g40600 1.0kb downstream 1.0kb downstream 1000 false Bd2: 40653220-40654219 Brachypodium distachyon
Bradi2g40600 2.0kb upstream 2.0kb upstream 7094 true Bd2: 40646126-40653219 Brachypodium distachyon
Bradi2g40600 2.0kb upstream 2.0kb upstream 2000 false Bd2: 40646126-40648125 Brachypodium distachyon
Bradi2g40600 2.0kb downstream 2.0kb downstream 7094 true Bd2: 40648126-40655219 Brachypodium distachyon
Bradi2g40600 2.0kb downstream 2.0kb downstream 2000 false Bd2: 40653220-40655219 Brachypodium distachyon
Bradi2g40600 5.0kb upstream 5.0kb upstream 10094 true Bd2: 40643126-40653219 Brachypodium distachyon
Bradi2g40600 5.0kb upstream 5.0kb upstream 5000 false Bd2: 40643126-40648125 Brachypodium distachyon
Bradi2g40600 5.0kb downstream 5.0kb downstream 10094 true Bd2: 40648126-40658219 Brachypodium distachyon
Bradi2g40600 5.0kb downstream 5.0kb downstream 5000 false Bd2: 40653220-40658219 Brachypodium distachyon
Bradi2g40600 10.0kb upstream 10.0kb upstream 15094 true Bd2: 40638126-40653219 Brachypodium distachyon
Bradi2g40600 10.0kb upstream 10.0kb upstream 10000 false Bd2: 40638126-40648125 Brachypodium distachyon
Bradi2g40600 10.0kb downstream 10.0kb downstream 15094 true Bd2: 40648126-40663219 Brachypodium distachyon
Bradi2g40600 10.0kb downstream 10.0kb downstream 10000 false Bd2: 40653220-40663219 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572568 5269 Grass View MSA
122046085 5273 Angiosperm View MSA
123428876 5275 Viridiplantae View MSA
121346646 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.177        
cufflinks 11.184     High  
cufflinks 9.906        
cufflinks 8.392        
cufflinks 1.394        
cufflinks 10.27     High  
cufflinks 8.818        
cufflinks 8.441        
cufflinks 11.142     High  
cufflinks 5.875        
cufflinks 0.067     Low Low
cufflinks 8.205        
cufflinks 0.157       Low
cufflinks 0.088       Low
cufflinks 1.398        
cufflinks 10.877     High  
cufflinks 7.507        
cufflinks 18.847     High High
cufflinks 3.566        
cufflinks 0.293       Low
cufflinks 6.374        
cufflinks 10.551     High  
cufflinks 6.527        
cufflinks 7.038        
cufflinks 9.021        
cufflinks 8.543        
cufflinks 0.019     Low Low
cufflinks 6.988        
cufflinks 8.732        
cufflinks 11.565     High  

0 Strain