Gene : Bradi2g40770 B. distachyon v3.1
Defline:  (1 of 1) PTHR12326//PTHR12326:SF3 - PLECKSTRIN HOMOLOGY DOMAIN CONTAINING PROTEIN // DIFFERENTIALLY EXPRESSED IN FDCP 8 HOMOLOG Genomic Order:  4865
Name:  ? Bradi2g40770 Secondary Identifier:  ? PAC:32778940
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g40770 0.5kb upstream 0.5kb upstream 4507 true Bd2: 40841653-40846159 Brachypodium distachyon
Bradi2g40770 0.5kb upstream 0.5kb upstream 500 false Bd2: 40845660-40846159 Brachypodium distachyon
Bradi2g40770 0.5kb downstream 0.5kb downstream 4507 true Bd2: 40841153-40845659 Brachypodium distachyon
Bradi2g40770 0.5kb downstream 0.5kb downstream 500 false Bd2: 40841153-40841652 Brachypodium distachyon
Bradi2g40770 1.0kb upstream 1.0kb upstream 5007 true Bd2: 40841653-40846659 Brachypodium distachyon
Bradi2g40770 1.0kb upstream 1.0kb upstream 1000 false Bd2: 40845660-40846659 Brachypodium distachyon
Bradi2g40770 1.0kb downstream 1.0kb downstream 5007 true Bd2: 40840653-40845659 Brachypodium distachyon
Bradi2g40770 1.0kb downstream 1.0kb downstream 1000 false Bd2: 40840653-40841652 Brachypodium distachyon
Bradi2g40770 2.0kb upstream 2.0kb upstream 6007 true Bd2: 40841653-40847659 Brachypodium distachyon
Bradi2g40770 2.0kb upstream 2.0kb upstream 2000 false Bd2: 40845660-40847659 Brachypodium distachyon
Bradi2g40770 2.0kb downstream 2.0kb downstream 6007 true Bd2: 40839653-40845659 Brachypodium distachyon
Bradi2g40770 2.0kb downstream 2.0kb downstream 2000 false Bd2: 40839653-40841652 Brachypodium distachyon
Bradi2g40770 5.0kb upstream 5.0kb upstream 9007 true Bd2: 40841653-40850659 Brachypodium distachyon
Bradi2g40770 5.0kb upstream 5.0kb upstream 5000 false Bd2: 40845660-40850659 Brachypodium distachyon
Bradi2g40770 5.0kb downstream 5.0kb downstream 9007 true Bd2: 40836653-40845659 Brachypodium distachyon
Bradi2g40770 5.0kb downstream 5.0kb downstream 5000 false Bd2: 40836653-40841652 Brachypodium distachyon
Bradi2g40770 10.0kb upstream 10.0kb upstream 14007 true Bd2: 40841653-40855659 Brachypodium distachyon
Bradi2g40770 10.0kb upstream 10.0kb upstream 10000 false Bd2: 40845660-40855659 Brachypodium distachyon
Bradi2g40770 10.0kb downstream 10.0kb downstream 14007 true Bd2: 40831653-40845659 Brachypodium distachyon
Bradi2g40770 10.0kb downstream 10.0kb downstream 10000 false Bd2: 40831653-40841652 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571706 5269 Grass View MSA
122042332 5273 Angiosperm View MSA
121350531 5274 Embryophyte View MSA
123381775 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.603       Low
cufflinks 6.149        
cufflinks 6.674        
cufflinks 4.947        
cufflinks 3.278       Low
cufflinks 5.451        
cufflinks 5.756        
cufflinks 5.533        
cufflinks 5.874        
cufflinks 4.043        
cufflinks 5.148        
cufflinks 5.542        
cufflinks 5.183        
cufflinks 3.88        
cufflinks 4.1        
cufflinks 5.236        
cufflinks 4.504        
cufflinks 9.135       High
cufflinks 7.547       High
cufflinks 4.048        
cufflinks 4.79        
cufflinks 6.766        
cufflinks 5.266        
cufflinks 5.057        
cufflinks 4.433        
cufflinks 6.041        
cufflinks 6.537        
cufflinks 5.968        
cufflinks 5.331        
cufflinks 5.098        

0 Strain