Gene : Bradi2g40820 B. distachyon v3.1
Defline:  (1 of 2) K11843 - ubiquitin carboxyl-terminal hydrolase 14 [EC:3.4.19.12] (USP14, UBP6) Genomic Order:  4871
Name:  ? Bradi2g40820 Secondary Identifier:  ? PAC:32774725
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g40820 0.5kb upstream 0.5kb upstream 10993 true Bd2: 40885814-40896806 Brachypodium distachyon
Bradi2g40820 0.5kb upstream 0.5kb upstream 500 false Bd2: 40896307-40896806 Brachypodium distachyon
Bradi2g40820 0.5kb downstream 0.5kb downstream 10993 true Bd2: 40885314-40896306 Brachypodium distachyon
Bradi2g40820 0.5kb downstream 0.5kb downstream 500 false Bd2: 40885314-40885813 Brachypodium distachyon
Bradi2g40820 1.0kb upstream 1.0kb upstream 11493 true Bd2: 40885814-40897306 Brachypodium distachyon
Bradi2g40820 1.0kb upstream 1.0kb upstream 1000 false Bd2: 40896307-40897306 Brachypodium distachyon
Bradi2g40820 1.0kb downstream 1.0kb downstream 11493 true Bd2: 40884814-40896306 Brachypodium distachyon
Bradi2g40820 1.0kb downstream 1.0kb downstream 1000 false Bd2: 40884814-40885813 Brachypodium distachyon
Bradi2g40820 2.0kb upstream 2.0kb upstream 12493 true Bd2: 40885814-40898306 Brachypodium distachyon
Bradi2g40820 2.0kb upstream 2.0kb upstream 2000 false Bd2: 40896307-40898306 Brachypodium distachyon
Bradi2g40820 2.0kb downstream 2.0kb downstream 12493 true Bd2: 40883814-40896306 Brachypodium distachyon
Bradi2g40820 2.0kb downstream 2.0kb downstream 2000 false Bd2: 40883814-40885813 Brachypodium distachyon
Bradi2g40820 5.0kb upstream 5.0kb upstream 15493 true Bd2: 40885814-40901306 Brachypodium distachyon
Bradi2g40820 5.0kb upstream 5.0kb upstream 5000 false Bd2: 40896307-40901306 Brachypodium distachyon
Bradi2g40820 5.0kb downstream 5.0kb downstream 15493 true Bd2: 40880814-40896306 Brachypodium distachyon
Bradi2g40820 5.0kb downstream 5.0kb downstream 5000 false Bd2: 40880814-40885813 Brachypodium distachyon
Bradi2g40820 10.0kb upstream 10.0kb upstream 20493 true Bd2: 40885814-40906306 Brachypodium distachyon
Bradi2g40820 10.0kb upstream 10.0kb upstream 10000 false Bd2: 40896307-40906306 Brachypodium distachyon
Bradi2g40820 10.0kb downstream 10.0kb downstream 20493 true Bd2: 40875814-40896306 Brachypodium distachyon
Bradi2g40820 10.0kb downstream 10.0kb downstream 10000 false Bd2: 40875814-40885813 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573565 5269 Grass View MSA
122042667 5273 Angiosperm View MSA
121345593 5274 Embryophyte View MSA
123424639 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.313        
cufflinks 4.145        
cufflinks 3.703        
cufflinks 3.885        
cufflinks 3.027        
cufflinks 3.764        
cufflinks 3.647        
cufflinks 3.181        
cufflinks 3.542        
cufflinks 2.852        
cufflinks 2.438        
cufflinks 3.291        
cufflinks 2.133       Low
cufflinks 1.922       Low
cufflinks 2.652        
cufflinks 3.747        
cufflinks 3.484        
cufflinks 6.799       High
cufflinks 4.436        
cufflinks 2.912        
cufflinks 3.973        
cufflinks 3.377        
cufflinks 3.081        
cufflinks 3.414        
cufflinks 3.495        
cufflinks 3.66        
cufflinks 2.698        
cufflinks 3.166        
cufflinks 3.132        
cufflinks 4.378        

0 Strain