Gene : Bradi2g41140 B. distachyon v3.1
Defline:  (1 of 1) PTHR12292 - RWD DOMAIN-CONTAINING PROTEIN Genomic Order:  4910
Name:  ? Bradi2g41140 Secondary Identifier:  ? PAC:32781571
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g41140 0.5kb upstream 0.5kb upstream 10399 true Bd2: 41181167-41191565 Brachypodium distachyon
Bradi2g41140 0.5kb upstream 0.5kb upstream 500 false Bd2: 41191066-41191565 Brachypodium distachyon
Bradi2g41140 0.5kb downstream 0.5kb downstream 10399 true Bd2: 41180667-41191065 Brachypodium distachyon
Bradi2g41140 0.5kb downstream 0.5kb downstream 500 false Bd2: 41180667-41181166 Brachypodium distachyon
Bradi2g41140 1.0kb upstream 1.0kb upstream 10899 true Bd2: 41181167-41192065 Brachypodium distachyon
Bradi2g41140 1.0kb upstream 1.0kb upstream 1000 false Bd2: 41191066-41192065 Brachypodium distachyon
Bradi2g41140 1.0kb downstream 1.0kb downstream 10899 true Bd2: 41180167-41191065 Brachypodium distachyon
Bradi2g41140 1.0kb downstream 1.0kb downstream 1000 false Bd2: 41180167-41181166 Brachypodium distachyon
Bradi2g41140 2.0kb upstream 2.0kb upstream 11899 true Bd2: 41181167-41193065 Brachypodium distachyon
Bradi2g41140 2.0kb upstream 2.0kb upstream 2000 false Bd2: 41191066-41193065 Brachypodium distachyon
Bradi2g41140 2.0kb downstream 2.0kb downstream 11899 true Bd2: 41179167-41191065 Brachypodium distachyon
Bradi2g41140 2.0kb downstream 2.0kb downstream 2000 false Bd2: 41179167-41181166 Brachypodium distachyon
Bradi2g41140 5.0kb upstream 5.0kb upstream 14899 true Bd2: 41181167-41196065 Brachypodium distachyon
Bradi2g41140 5.0kb upstream 5.0kb upstream 5000 false Bd2: 41191066-41196065 Brachypodium distachyon
Bradi2g41140 5.0kb downstream 5.0kb downstream 14899 true Bd2: 41176167-41191065 Brachypodium distachyon
Bradi2g41140 5.0kb downstream 5.0kb downstream 5000 false Bd2: 41176167-41181166 Brachypodium distachyon
Bradi2g41140 10.0kb upstream 10.0kb upstream 19899 true Bd2: 41181167-41201065 Brachypodium distachyon
Bradi2g41140 10.0kb upstream 10.0kb upstream 10000 false Bd2: 41191066-41201065 Brachypodium distachyon
Bradi2g41140 10.0kb downstream 10.0kb downstream 19899 true Bd2: 41171167-41191065 Brachypodium distachyon
Bradi2g41140 10.0kb downstream 10.0kb downstream 10000 false Bd2: 41171167-41181166 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041023 5273 Angiosperm View MSA
124569005 5269 Grass View MSA
121346439 5274 Embryophyte View MSA
123425357 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.633        
cufflinks 6.358        
cufflinks 6.999        
cufflinks 7.005        
cufflinks 6.238        
cufflinks 5.144        
cufflinks 5.706        
cufflinks 5.15        
cufflinks 5.438        
cufflinks 6.24        
cufflinks 4.78       Low
cufflinks 4.999        
cufflinks 3.265       Low
cufflinks 3.907       Low
cufflinks 5.988        
cufflinks 4.84       Low
cufflinks 7.705        
cufflinks 6.959        
cufflinks 10.302       High
cufflinks 10.807       High
cufflinks 7.844        
cufflinks 6.06        
cufflinks 5.41        
cufflinks 5.227        
cufflinks 5.837        
cufflinks 7.526        
cufflinks 4.549       Low
cufflinks 7.205        
cufflinks 6.366        
cufflinks 6.889        

0 Strain