Gene : Bradi2g41451 B. distachyon v3.1
Defline:  (1 of 2) KOG4438 - Centromere-associated protein NUF2 Genomic Order:  4950
Name:  ? Bradi2g41451 Secondary Identifier:  ? PAC:32781745
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g41451 0.5kb upstream 0.5kb upstream 4288 true Bd2: 41441517-41445804 Brachypodium distachyon
Bradi2g41451 0.5kb upstream 0.5kb upstream 500 false Bd2: 41441517-41442016 Brachypodium distachyon
Bradi2g41451 0.5kb downstream 0.5kb downstream 4288 true Bd2: 41442017-41446304 Brachypodium distachyon
Bradi2g41451 0.5kb downstream 0.5kb downstream 500 false Bd2: 41445805-41446304 Brachypodium distachyon
Bradi2g41451 1.0kb upstream 1.0kb upstream 4788 true Bd2: 41441017-41445804 Brachypodium distachyon
Bradi2g41451 1.0kb upstream 1.0kb upstream 1000 false Bd2: 41441017-41442016 Brachypodium distachyon
Bradi2g41451 1.0kb downstream 1.0kb downstream 4788 true Bd2: 41442017-41446804 Brachypodium distachyon
Bradi2g41451 1.0kb downstream 1.0kb downstream 1000 false Bd2: 41445805-41446804 Brachypodium distachyon
Bradi2g41451 2.0kb upstream 2.0kb upstream 5788 true Bd2: 41440017-41445804 Brachypodium distachyon
Bradi2g41451 2.0kb upstream 2.0kb upstream 2000 false Bd2: 41440017-41442016 Brachypodium distachyon
Bradi2g41451 2.0kb downstream 2.0kb downstream 5788 true Bd2: 41442017-41447804 Brachypodium distachyon
Bradi2g41451 2.0kb downstream 2.0kb downstream 2000 false Bd2: 41445805-41447804 Brachypodium distachyon
Bradi2g41451 5.0kb upstream 5.0kb upstream 8788 true Bd2: 41437017-41445804 Brachypodium distachyon
Bradi2g41451 5.0kb upstream 5.0kb upstream 5000 false Bd2: 41437017-41442016 Brachypodium distachyon
Bradi2g41451 5.0kb downstream 5.0kb downstream 8788 true Bd2: 41442017-41450804 Brachypodium distachyon
Bradi2g41451 5.0kb downstream 5.0kb downstream 5000 false Bd2: 41445805-41450804 Brachypodium distachyon
Bradi2g41451 10.0kb upstream 10.0kb upstream 13788 true Bd2: 41432017-41445804 Brachypodium distachyon
Bradi2g41451 10.0kb upstream 10.0kb upstream 10000 false Bd2: 41432017-41442016 Brachypodium distachyon
Bradi2g41451 10.0kb downstream 10.0kb downstream 13788 true Bd2: 41442017-41455804 Brachypodium distachyon
Bradi2g41451 10.0kb downstream 10.0kb downstream 10000 false Bd2: 41445805-41455804 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124472047 5269 Grass Singleton cluster - no MSA
122050952 5273 Angiosperm View MSA
121351685 5274 Embryophyte View MSA
123425820 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.031     Low  
cufflinks 0.089     Low  
cufflinks 0.073     Low  
cufflinks 0.079     Low  
cufflinks 0.021     Low  
cufflinks 0.054     Low  
cufflinks 0.068     Low  
cufflinks 0.05     Low  
cufflinks 0.092     Low  
cufflinks 0.054     Low  
cufflinks 0.001     Low Low
cufflinks 0.04     Low  
cufflinks 0.003     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.044     Low  
cufflinks 0.066     Low  
cufflinks 0.082     Low  
cufflinks 0.065     Low  
cufflinks 0.006     Low Low
cufflinks 0.042     Low  
cufflinks 0.079     Low  
cufflinks 0.047     Low  
cufflinks 0.051     Low  
cufflinks 0.063     Low  
cufflinks 0.094     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.069     Low  
cufflinks 0.066     Low  
cufflinks 0.074     Low  

0 Strain