Gene : Bradi2g41490 B. distachyon v3.1
Genomic Order:  4955 Name:  ? Bradi2g41490
Secondary Identifier:  ? PAC:32770860
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g41490 0.5kb upstream 0.5kb upstream 3720 true Bd2: 41471249-41474968 Brachypodium distachyon
Bradi2g41490 0.5kb upstream 0.5kb upstream 500 false Bd2: 41474469-41474968 Brachypodium distachyon
Bradi2g41490 0.5kb downstream 0.5kb downstream 3720 true Bd2: 41470749-41474468 Brachypodium distachyon
Bradi2g41490 0.5kb downstream 0.5kb downstream 500 false Bd2: 41470749-41471248 Brachypodium distachyon
Bradi2g41490 1.0kb upstream 1.0kb upstream 4220 true Bd2: 41471249-41475468 Brachypodium distachyon
Bradi2g41490 1.0kb upstream 1.0kb upstream 1000 false Bd2: 41474469-41475468 Brachypodium distachyon
Bradi2g41490 1.0kb downstream 1.0kb downstream 4220 true Bd2: 41470249-41474468 Brachypodium distachyon
Bradi2g41490 1.0kb downstream 1.0kb downstream 1000 false Bd2: 41470249-41471248 Brachypodium distachyon
Bradi2g41490 2.0kb upstream 2.0kb upstream 5220 true Bd2: 41471249-41476468 Brachypodium distachyon
Bradi2g41490 2.0kb upstream 2.0kb upstream 2000 false Bd2: 41474469-41476468 Brachypodium distachyon
Bradi2g41490 2.0kb downstream 2.0kb downstream 5220 true Bd2: 41469249-41474468 Brachypodium distachyon
Bradi2g41490 2.0kb downstream 2.0kb downstream 2000 false Bd2: 41469249-41471248 Brachypodium distachyon
Bradi2g41490 5.0kb upstream 5.0kb upstream 8220 true Bd2: 41471249-41479468 Brachypodium distachyon
Bradi2g41490 5.0kb upstream 5.0kb upstream 5000 false Bd2: 41474469-41479468 Brachypodium distachyon
Bradi2g41490 5.0kb downstream 5.0kb downstream 8220 true Bd2: 41466249-41474468 Brachypodium distachyon
Bradi2g41490 5.0kb downstream 5.0kb downstream 5000 false Bd2: 41466249-41471248 Brachypodium distachyon
Bradi2g41490 10.0kb upstream 10.0kb upstream 13220 true Bd2: 41471249-41484468 Brachypodium distachyon
Bradi2g41490 10.0kb upstream 10.0kb upstream 10000 false Bd2: 41474469-41484468 Brachypodium distachyon
Bradi2g41490 10.0kb downstream 10.0kb downstream 13220 true Bd2: 41461249-41474468 Brachypodium distachyon
Bradi2g41490 10.0kb downstream 10.0kb downstream 10000 false Bd2: 41461249-41471248 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569577 5269 Grass View MSA
122041581 5273 Angiosperm View MSA
121351725 5274 Embryophyte View MSA
123382293 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.766     High High
cufflinks 3.463        
cufflinks 4.492        
cufflinks 2.846        
cufflinks 6.224        
cufflinks 3.547        
cufflinks 3.311        
cufflinks 5.425        
cufflinks 2.484        
cufflinks 4.22        
cufflinks 13.481     High High
cufflinks 12.733     High High
cufflinks 3.196        
cufflinks 2.198       Low
cufflinks 10.142     High High
cufflinks 5.339        
cufflinks 2.79        
cufflinks 5.409        
cufflinks 16.938     High High
cufflinks 12.358     High High
cufflinks 2.039       Low
cufflinks 4.536        
cufflinks 1.721       Low
cufflinks 2.167       Low
cufflinks 2.242       Low
cufflinks 5.267        
cufflinks 3.04        
cufflinks 5.377        
cufflinks 4.463        
cufflinks 5.655        

0 Strain