Gene : Bradi2g41300 B. distachyon v3.1
Defline:  (1 of 1) PTHR11014//PTHR11014:SF55 - PEPTIDASE M20 FAMILY MEMBER // IAA-AMINO ACID HYDROLASE ILR1-LIKE 1-RELATED Genomic Order:  4935
Name:  ? Bradi2g41300 Secondary Identifier:  ? PAC:32776680
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g41300 0.5kb upstream 0.5kb upstream 5404 true Bd2: 41327261-41332664 Brachypodium distachyon
Bradi2g41300 0.5kb upstream 0.5kb upstream 500 false Bd2: 41332165-41332664 Brachypodium distachyon
Bradi2g41300 0.5kb downstream 0.5kb downstream 5404 true Bd2: 41326761-41332164 Brachypodium distachyon
Bradi2g41300 0.5kb downstream 0.5kb downstream 500 false Bd2: 41326761-41327260 Brachypodium distachyon
Bradi2g41300 1.0kb upstream 1.0kb upstream 5904 true Bd2: 41327261-41333164 Brachypodium distachyon
Bradi2g41300 1.0kb upstream 1.0kb upstream 1000 false Bd2: 41332165-41333164 Brachypodium distachyon
Bradi2g41300 1.0kb downstream 1.0kb downstream 5904 true Bd2: 41326261-41332164 Brachypodium distachyon
Bradi2g41300 1.0kb downstream 1.0kb downstream 1000 false Bd2: 41326261-41327260 Brachypodium distachyon
Bradi2g41300 2.0kb upstream 2.0kb upstream 6904 true Bd2: 41327261-41334164 Brachypodium distachyon
Bradi2g41300 2.0kb upstream 2.0kb upstream 2000 false Bd2: 41332165-41334164 Brachypodium distachyon
Bradi2g41300 2.0kb downstream 2.0kb downstream 6904 true Bd2: 41325261-41332164 Brachypodium distachyon
Bradi2g41300 2.0kb downstream 2.0kb downstream 2000 false Bd2: 41325261-41327260 Brachypodium distachyon
Bradi2g41300 5.0kb upstream 5.0kb upstream 9904 true Bd2: 41327261-41337164 Brachypodium distachyon
Bradi2g41300 5.0kb upstream 5.0kb upstream 5000 false Bd2: 41332165-41337164 Brachypodium distachyon
Bradi2g41300 5.0kb downstream 5.0kb downstream 9904 true Bd2: 41322261-41332164 Brachypodium distachyon
Bradi2g41300 5.0kb downstream 5.0kb downstream 5000 false Bd2: 41322261-41327260 Brachypodium distachyon
Bradi2g41300 10.0kb upstream 10.0kb upstream 14904 true Bd2: 41327261-41342164 Brachypodium distachyon
Bradi2g41300 10.0kb upstream 10.0kb upstream 10000 false Bd2: 41332165-41342164 Brachypodium distachyon
Bradi2g41300 10.0kb downstream 10.0kb downstream 14904 true Bd2: 41317261-41332164 Brachypodium distachyon
Bradi2g41300 10.0kb downstream 10.0kb downstream 10000 false Bd2: 41317261-41327260 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574004 5269 Grass View MSA
122042438 5273 Angiosperm View MSA
121350602 5274 Embryophyte View MSA
123427442 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.098        
cufflinks 3.952        
cufflinks 4.46        
cufflinks 3.263        
cufflinks 2.676       Low
cufflinks 3.185        
cufflinks 3.974        
cufflinks 2.586       Low
cufflinks 2.853        
cufflinks 2.845        
cufflinks 3.867        
cufflinks 3.275        
cufflinks 3.619        
cufflinks 3.133        
cufflinks 2.598       Low
cufflinks 3.468        
cufflinks 3.674        
cufflinks 8.414       High
cufflinks 7.288       High
cufflinks 5.039        
cufflinks 5.378       High
cufflinks 2.991        
cufflinks 2.419       Low
cufflinks 2.618       Low
cufflinks 2.945        
cufflinks 4.008        
cufflinks 4.623        
cufflinks 4.035        
cufflinks 3.807        
cufflinks 4.173        

0 Strain