Gene : Bradi2g36810 B. distachyon v3.1
Defline:  (1 of 2) PF00872//PF03101//PF04434 - Transposase, Mutator family (Transposase_mut) // FAR1 DNA-binding domain (FAR1) // SWIM zinc finger (SWIM) Genomic Order:  4363
Name:  ? Bradi2g36810 Secondary Identifier:  ? PAC:32779608
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g36810 0.5kb upstream 0.5kb upstream 2644 true Bd2: 36976219-36978862 Brachypodium distachyon
Bradi2g36810 0.5kb upstream 0.5kb upstream 500 false Bd2: 36976219-36976718 Brachypodium distachyon
Bradi2g36810 0.5kb downstream 0.5kb downstream 2644 true Bd2: 36976719-36979362 Brachypodium distachyon
Bradi2g36810 0.5kb downstream 0.5kb downstream 500 false Bd2: 36978863-36979362 Brachypodium distachyon
Bradi2g36810 1.0kb upstream 1.0kb upstream 3144 true Bd2: 36975719-36978862 Brachypodium distachyon
Bradi2g36810 1.0kb upstream 1.0kb upstream 1000 false Bd2: 36975719-36976718 Brachypodium distachyon
Bradi2g36810 1.0kb downstream 1.0kb downstream 3144 true Bd2: 36976719-36979862 Brachypodium distachyon
Bradi2g36810 1.0kb downstream 1.0kb downstream 1000 false Bd2: 36978863-36979862 Brachypodium distachyon
Bradi2g36810 2.0kb upstream 2.0kb upstream 4144 true Bd2: 36974719-36978862 Brachypodium distachyon
Bradi2g36810 2.0kb upstream 2.0kb upstream 2000 false Bd2: 36974719-36976718 Brachypodium distachyon
Bradi2g36810 2.0kb downstream 2.0kb downstream 4144 true Bd2: 36976719-36980862 Brachypodium distachyon
Bradi2g36810 2.0kb downstream 2.0kb downstream 2000 false Bd2: 36978863-36980862 Brachypodium distachyon
Bradi2g36810 5.0kb upstream 5.0kb upstream 7144 true Bd2: 36971719-36978862 Brachypodium distachyon
Bradi2g36810 5.0kb upstream 5.0kb upstream 5000 false Bd2: 36971719-36976718 Brachypodium distachyon
Bradi2g36810 5.0kb downstream 5.0kb downstream 7144 true Bd2: 36976719-36983862 Brachypodium distachyon
Bradi2g36810 5.0kb downstream 5.0kb downstream 5000 false Bd2: 36978863-36983862 Brachypodium distachyon
Bradi2g36810 10.0kb upstream 10.0kb upstream 12144 true Bd2: 36966719-36978862 Brachypodium distachyon
Bradi2g36810 10.0kb upstream 10.0kb upstream 10000 false Bd2: 36966719-36976718 Brachypodium distachyon
Bradi2g36810 10.0kb downstream 10.0kb downstream 12144 true Bd2: 36976719-36988862 Brachypodium distachyon
Bradi2g36810 10.0kb downstream 10.0kb downstream 10000 false Bd2: 36978863-36988862 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124585095 5269 Grass View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.042     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain