Gene : Bradi4g08790 B. distachyon v3.1
Defline:  (1 of 2) K03456 - serine/threonine-protein phosphatase 2A regulatory subunit A (PPP2R1) Genomic Order:  1159
Name:  ? Bradi4g08790 Secondary Identifier:  ? PAC:32789771
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g08790 0.5kb upstream 0.5kb upstream 9107 true Bd4: 7918198-7927304 Brachypodium distachyon
Bradi4g08790 0.5kb upstream 0.5kb upstream 500 false Bd4: 7918198-7918697 Brachypodium distachyon
Bradi4g08790 0.5kb downstream 0.5kb downstream 9107 true Bd4: 7918698-7927804 Brachypodium distachyon
Bradi4g08790 0.5kb downstream 0.5kb downstream 500 false Bd4: 7927305-7927804 Brachypodium distachyon
Bradi4g08790 1.0kb upstream 1.0kb upstream 9607 true Bd4: 7917698-7927304 Brachypodium distachyon
Bradi4g08790 1.0kb upstream 1.0kb upstream 1000 false Bd4: 7917698-7918697 Brachypodium distachyon
Bradi4g08790 1.0kb downstream 1.0kb downstream 9607 true Bd4: 7918698-7928304 Brachypodium distachyon
Bradi4g08790 1.0kb downstream 1.0kb downstream 1000 false Bd4: 7927305-7928304 Brachypodium distachyon
Bradi4g08790 2.0kb upstream 2.0kb upstream 10607 true Bd4: 7916698-7927304 Brachypodium distachyon
Bradi4g08790 2.0kb upstream 2.0kb upstream 2000 false Bd4: 7916698-7918697 Brachypodium distachyon
Bradi4g08790 2.0kb downstream 2.0kb downstream 10607 true Bd4: 7918698-7929304 Brachypodium distachyon
Bradi4g08790 2.0kb downstream 2.0kb downstream 2000 false Bd4: 7927305-7929304 Brachypodium distachyon
Bradi4g08790 5.0kb upstream 5.0kb upstream 13607 true Bd4: 7913698-7927304 Brachypodium distachyon
Bradi4g08790 5.0kb upstream 5.0kb upstream 5000 false Bd4: 7913698-7918697 Brachypodium distachyon
Bradi4g08790 5.0kb downstream 5.0kb downstream 13607 true Bd4: 7918698-7932304 Brachypodium distachyon
Bradi4g08790 5.0kb downstream 5.0kb downstream 5000 false Bd4: 7927305-7932304 Brachypodium distachyon
Bradi4g08790 10.0kb upstream 10.0kb upstream 18607 true Bd4: 7908698-7927304 Brachypodium distachyon
Bradi4g08790 10.0kb upstream 10.0kb upstream 10000 false Bd4: 7908698-7918697 Brachypodium distachyon
Bradi4g08790 10.0kb downstream 10.0kb downstream 18607 true Bd4: 7918698-7937304 Brachypodium distachyon
Bradi4g08790 10.0kb downstream 10.0kb downstream 10000 false Bd4: 7927305-7937304 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569380 5269 Grass View MSA
122049512 5273 Angiosperm View MSA
121346959 5274 Embryophyte View MSA
123427747 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.666        
cufflinks 6.501        
cufflinks 7.096        
cufflinks 6.028        
cufflinks 4.159        
cufflinks 6.669        
cufflinks 5.384        
cufflinks 6.275        
cufflinks 6.685        
cufflinks 4.498        
cufflinks 5.503        
cufflinks 6.907        
cufflinks 4.562        
cufflinks 4.008        
cufflinks 4.381        
cufflinks 6.476        
cufflinks 4.664        
cufflinks 10.296       High
cufflinks 4.761        
cufflinks 2.391       Low
cufflinks 6.615        
cufflinks 7.699        
cufflinks 6.534        
cufflinks 6.554        
cufflinks 5.44        
cufflinks 6.51        
cufflinks 5.102        
cufflinks 6.016        
cufflinks 6.438        
cufflinks 8.165        

0 Strain