Gene : Bradi2g37730 B. distachyon v3.1
Defline:  (1 of 1) PTHR28626:SF3 - SRR1-LIKE PROTEIN Genomic Order:  4491
Name:  ? Bradi2g37730 Secondary Identifier:  ? PAC:32776683
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g37730 0.5kb upstream 0.5kb upstream 1879 true Bd2: 37861161-37863039 Brachypodium distachyon
Bradi2g37730 0.5kb upstream 0.5kb upstream 500 false Bd2: 37862540-37863039 Brachypodium distachyon
Bradi2g37730 0.5kb downstream 0.5kb downstream 1879 true Bd2: 37860661-37862539 Brachypodium distachyon
Bradi2g37730 0.5kb downstream 0.5kb downstream 500 false Bd2: 37860661-37861160 Brachypodium distachyon
Bradi2g37730 1.0kb upstream 1.0kb upstream 2379 true Bd2: 37861161-37863539 Brachypodium distachyon
Bradi2g37730 1.0kb upstream 1.0kb upstream 1000 false Bd2: 37862540-37863539 Brachypodium distachyon
Bradi2g37730 1.0kb downstream 1.0kb downstream 2379 true Bd2: 37860161-37862539 Brachypodium distachyon
Bradi2g37730 1.0kb downstream 1.0kb downstream 1000 false Bd2: 37860161-37861160 Brachypodium distachyon
Bradi2g37730 2.0kb upstream 2.0kb upstream 3379 true Bd2: 37861161-37864539 Brachypodium distachyon
Bradi2g37730 2.0kb upstream 2.0kb upstream 2000 false Bd2: 37862540-37864539 Brachypodium distachyon
Bradi2g37730 2.0kb downstream 2.0kb downstream 3379 true Bd2: 37859161-37862539 Brachypodium distachyon
Bradi2g37730 2.0kb downstream 2.0kb downstream 2000 false Bd2: 37859161-37861160 Brachypodium distachyon
Bradi2g37730 5.0kb upstream 5.0kb upstream 6379 true Bd2: 37861161-37867539 Brachypodium distachyon
Bradi2g37730 5.0kb upstream 5.0kb upstream 5000 false Bd2: 37862540-37867539 Brachypodium distachyon
Bradi2g37730 5.0kb downstream 5.0kb downstream 6379 true Bd2: 37856161-37862539 Brachypodium distachyon
Bradi2g37730 5.0kb downstream 5.0kb downstream 5000 false Bd2: 37856161-37861160 Brachypodium distachyon
Bradi2g37730 10.0kb upstream 10.0kb upstream 11379 true Bd2: 37861161-37872539 Brachypodium distachyon
Bradi2g37730 10.0kb upstream 10.0kb upstream 10000 false Bd2: 37862540-37872539 Brachypodium distachyon
Bradi2g37730 10.0kb downstream 10.0kb downstream 11379 true Bd2: 37851161-37862539 Brachypodium distachyon
Bradi2g37730 10.0kb downstream 10.0kb downstream 10000 false Bd2: 37851161-37861160 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578120 5269 Grass View MSA
122046213 5273 Angiosperm View MSA
121347995 5274 Embryophyte View MSA
123428800 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.603       Low
cufflinks 1.281        
cufflinks 1.518        
cufflinks 1.449        
cufflinks 0.402       Low
cufflinks 1.069        
cufflinks 1.776        
cufflinks 0.868        
cufflinks 1.68        
cufflinks 1.563        
cufflinks 1.947        
cufflinks 0.51       Low
cufflinks 0.764        
cufflinks 1.617        
cufflinks 0.471       Low
cufflinks 1.381        
cufflinks 2.534       High
cufflinks 0.824        
cufflinks 2.413       High
cufflinks 1.457        
cufflinks 1.958        
cufflinks 0.682        
cufflinks 1.425        
cufflinks 1.631        
cufflinks 1.59        
cufflinks 1.476        
cufflinks 0.771        
cufflinks 1.896        
cufflinks 1.555        
cufflinks 1.243        

0 Strain