Gene : Bradi2g37570 B. distachyon v3.1

Defline:  (1 of 2) PF00122//PF00689//PF00690//PF13246 - E1-E2 ATPase (E1-E2_ATPase) // Cation transporting ATPase, C-terminus (Cation_ATPase_C) // Cation transporter/ATPase, N-terminus (Cation_ATPase_N) // Cation transport ATPase (P-type) (Cation_ATPase) Genomic Order:  4464
Name:  ? Bradi2g37570 Secondary Identifier:  ? PAC:32772190

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g37570 0.5kb upstream 0.5kb upstream 6160 true Bd2: 37668324-37674483 Brachypodium distachyon
Bradi2g37570 0.5kb upstream 0.5kb upstream 500 false Bd2: 37673984-37674483 Brachypodium distachyon
Bradi2g37570 0.5kb downstream 0.5kb downstream 6160 true Bd2: 37667824-37673983 Brachypodium distachyon
Bradi2g37570 0.5kb downstream 0.5kb downstream 500 false Bd2: 37667824-37668323 Brachypodium distachyon
Bradi2g37570 1.0kb upstream 1.0kb upstream 6660 true Bd2: 37668324-37674983 Brachypodium distachyon
Bradi2g37570 1.0kb upstream 1.0kb upstream 1000 false Bd2: 37673984-37674983 Brachypodium distachyon
Bradi2g37570 1.0kb downstream 1.0kb downstream 6660 true Bd2: 37667324-37673983 Brachypodium distachyon
Bradi2g37570 1.0kb downstream 1.0kb downstream 1000 false Bd2: 37667324-37668323 Brachypodium distachyon
Bradi2g37570 2.0kb upstream 2.0kb upstream 7660 true Bd2: 37668324-37675983 Brachypodium distachyon
Bradi2g37570 2.0kb upstream 2.0kb upstream 2000 false Bd2: 37673984-37675983 Brachypodium distachyon
Bradi2g37570 2.0kb downstream 2.0kb downstream 7660 true Bd2: 37666324-37673983 Brachypodium distachyon
Bradi2g37570 2.0kb downstream 2.0kb downstream 2000 false Bd2: 37666324-37668323 Brachypodium distachyon
Bradi2g37570 5.0kb upstream 5.0kb upstream 10660 true Bd2: 37668324-37678983 Brachypodium distachyon
Bradi2g37570 5.0kb upstream 5.0kb upstream 5000 false Bd2: 37673984-37678983 Brachypodium distachyon
Bradi2g37570 5.0kb downstream 5.0kb downstream 10660 true Bd2: 37663324-37673983 Brachypodium distachyon
Bradi2g37570 5.0kb downstream 5.0kb downstream 5000 false Bd2: 37663324-37668323 Brachypodium distachyon
Bradi2g37570 10.0kb upstream 10.0kb upstream 15660 true Bd2: 37668324-37683983 Brachypodium distachyon
Bradi2g37570 10.0kb upstream 10.0kb upstream 10000 false Bd2: 37673984-37683983 Brachypodium distachyon
Bradi2g37570 10.0kb downstream 10.0kb downstream 15660 true Bd2: 37658324-37673983 Brachypodium distachyon
Bradi2g37570 10.0kb downstream 10.0kb downstream 10000 false Bd2: 37658324-37668323 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124581961 5269 Grass View MSA
122046254 5273 Angiosperm View MSA
121349492 5274 Embryophyte View MSA
123427421 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.375     High  
cufflinks 17.581     High  
cufflinks 14.463     High  
cufflinks 10.366        
cufflinks 7.87        
cufflinks 12.208     High  
cufflinks 14.731     High  
cufflinks 10.795     High  
cufflinks 11.369     High  
cufflinks 5.542       Low
cufflinks 12.305     High  
cufflinks 19.528     High  
cufflinks 8.291     High  
cufflinks 6.797       Low
cufflinks 9.418     High  
cufflinks 13.688     High  
cufflinks 7.514        
cufflinks 25.655     High High
cufflinks 19.641     High  
cufflinks 34.825     High High
cufflinks 14.827     High  
cufflinks 10.693     High  
cufflinks 11.462     High  
cufflinks 10.349     High  
cufflinks 7.985        
cufflinks 11.074     High  
cufflinks 17.422     High  
cufflinks 11.729     High  
cufflinks 9.778        
cufflinks 19.394     High  

0 Strain