Gene : Bradi2g38250 B. distachyon v3.1
Defline:  (1 of 15) PF14383 - DUF761-associated sequence motif (VARLMGL) Genomic Order:  4566
Name:  ? Bradi2g38250 Secondary Identifier:  ? PAC:32775436
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g38250 0.5kb upstream 0.5kb upstream 6991 true Bd2: 38360459-38367449 Brachypodium distachyon
Bradi2g38250 0.5kb upstream 0.5kb upstream 500 false Bd2: 38366950-38367449 Brachypodium distachyon
Bradi2g38250 0.5kb downstream 0.5kb downstream 6991 true Bd2: 38359959-38366949 Brachypodium distachyon
Bradi2g38250 0.5kb downstream 0.5kb downstream 500 false Bd2: 38359959-38360458 Brachypodium distachyon
Bradi2g38250 1.0kb upstream 1.0kb upstream 7491 true Bd2: 38360459-38367949 Brachypodium distachyon
Bradi2g38250 1.0kb upstream 1.0kb upstream 1000 false Bd2: 38366950-38367949 Brachypodium distachyon
Bradi2g38250 1.0kb downstream 1.0kb downstream 7491 true Bd2: 38359459-38366949 Brachypodium distachyon
Bradi2g38250 1.0kb downstream 1.0kb downstream 1000 false Bd2: 38359459-38360458 Brachypodium distachyon
Bradi2g38250 2.0kb upstream 2.0kb upstream 8491 true Bd2: 38360459-38368949 Brachypodium distachyon
Bradi2g38250 2.0kb upstream 2.0kb upstream 2000 false Bd2: 38366950-38368949 Brachypodium distachyon
Bradi2g38250 2.0kb downstream 2.0kb downstream 8491 true Bd2: 38358459-38366949 Brachypodium distachyon
Bradi2g38250 2.0kb downstream 2.0kb downstream 2000 false Bd2: 38358459-38360458 Brachypodium distachyon
Bradi2g38250 5.0kb upstream 5.0kb upstream 11491 true Bd2: 38360459-38371949 Brachypodium distachyon
Bradi2g38250 5.0kb upstream 5.0kb upstream 5000 false Bd2: 38366950-38371949 Brachypodium distachyon
Bradi2g38250 5.0kb downstream 5.0kb downstream 11491 true Bd2: 38355459-38366949 Brachypodium distachyon
Bradi2g38250 5.0kb downstream 5.0kb downstream 5000 false Bd2: 38355459-38360458 Brachypodium distachyon
Bradi2g38250 10.0kb upstream 10.0kb upstream 16491 true Bd2: 38360459-38376949 Brachypodium distachyon
Bradi2g38250 10.0kb upstream 10.0kb upstream 10000 false Bd2: 38366950-38376949 Brachypodium distachyon
Bradi2g38250 10.0kb downstream 10.0kb downstream 16491 true Bd2: 38350459-38366949 Brachypodium distachyon
Bradi2g38250 10.0kb downstream 10.0kb downstream 10000 false Bd2: 38350459-38360458 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568791 5269 Grass View MSA
122050315 5273 Angiosperm View MSA
121311850 5274 Embryophyte View MSA
123349090 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.224        
cufflinks 0.138        
cufflinks 0.139        
cufflinks 0.232        
cufflinks 0.309        
cufflinks 0.144        
cufflinks 0.227        
cufflinks 0.248        
cufflinks 0.237        
cufflinks 0.564       High
cufflinks 0.187        
cufflinks 0.18        
cufflinks 0.156        
cufflinks 0.119       Low
cufflinks 0.166        
cufflinks 0.173        
cufflinks 0.253        
cufflinks 0.293        
cufflinks 0.184     Low  
cufflinks 0.102     Low Low
cufflinks 0.423       High
cufflinks 0.274        
cufflinks 0.35       High
cufflinks 0.187        
cufflinks 0.16        
cufflinks 0.253        
cufflinks 0.206        
cufflinks 0.266        
cufflinks 0.257        
cufflinks 0.288        

0 Strain