Gene : Bradi2g38750 B. distachyon v3.1
Defline:  (1 of 2) PTHR15371:SF2 - OUTER ENVELOPE PORE PROTEIN 16-1, CHLOROPLASTIC Genomic Order:  4631
Name:  ? Bradi2g38750 Secondary Identifier:  ? PAC:32771723
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g38750 0.5kb upstream 0.5kb upstream 2510 true Bd2: 38768132-38770641 Brachypodium distachyon
Bradi2g38750 0.5kb upstream 0.5kb upstream 500 false Bd2: 38768132-38768631 Brachypodium distachyon
Bradi2g38750 0.5kb downstream 0.5kb downstream 2510 true Bd2: 38768632-38771141 Brachypodium distachyon
Bradi2g38750 0.5kb downstream 0.5kb downstream 500 false Bd2: 38770642-38771141 Brachypodium distachyon
Bradi2g38750 1.0kb upstream 1.0kb upstream 3010 true Bd2: 38767632-38770641 Brachypodium distachyon
Bradi2g38750 1.0kb upstream 1.0kb upstream 1000 false Bd2: 38767632-38768631 Brachypodium distachyon
Bradi2g38750 1.0kb downstream 1.0kb downstream 3010 true Bd2: 38768632-38771641 Brachypodium distachyon
Bradi2g38750 1.0kb downstream 1.0kb downstream 1000 false Bd2: 38770642-38771641 Brachypodium distachyon
Bradi2g38750 2.0kb upstream 2.0kb upstream 4010 true Bd2: 38766632-38770641 Brachypodium distachyon
Bradi2g38750 2.0kb upstream 2.0kb upstream 2000 false Bd2: 38766632-38768631 Brachypodium distachyon
Bradi2g38750 2.0kb downstream 2.0kb downstream 4010 true Bd2: 38768632-38772641 Brachypodium distachyon
Bradi2g38750 2.0kb downstream 2.0kb downstream 2000 false Bd2: 38770642-38772641 Brachypodium distachyon
Bradi2g38750 5.0kb upstream 5.0kb upstream 7010 true Bd2: 38763632-38770641 Brachypodium distachyon
Bradi2g38750 5.0kb upstream 5.0kb upstream 5000 false Bd2: 38763632-38768631 Brachypodium distachyon
Bradi2g38750 5.0kb downstream 5.0kb downstream 7010 true Bd2: 38768632-38775641 Brachypodium distachyon
Bradi2g38750 5.0kb downstream 5.0kb downstream 5000 false Bd2: 38770642-38775641 Brachypodium distachyon
Bradi2g38750 10.0kb upstream 10.0kb upstream 12010 true Bd2: 38758632-38770641 Brachypodium distachyon
Bradi2g38750 10.0kb upstream 10.0kb upstream 10000 false Bd2: 38758632-38768631 Brachypodium distachyon
Bradi2g38750 10.0kb downstream 10.0kb downstream 12010 true Bd2: 38768632-38780641 Brachypodium distachyon
Bradi2g38750 10.0kb downstream 10.0kb downstream 10000 false Bd2: 38770642-38780641 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577178 5269 Grass View MSA
122042494 5273 Angiosperm View MSA
121351081 5274 Embryophyte View MSA
123382000 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.525     High  
cufflinks 13.481     High  
cufflinks 6.086       Low
cufflinks 15.194     High  
cufflinks 41.33     High High
cufflinks 16.948     High  
cufflinks 18.497     High  
cufflinks 23.348     High  
cufflinks 22.915     High  
cufflinks 22.47     High  
cufflinks 21.489     High  
cufflinks 13.897     High  
cufflinks 16.255     High  
cufflinks 23.706     High  
cufflinks 26.028     High  
cufflinks 14.61     High  
cufflinks 29.935     High High
cufflinks 2.128       Low
cufflinks 28.812     High High
cufflinks 19.908     High  
cufflinks 15.304     High  
cufflinks 14.528     High  
cufflinks 26.039     High  
cufflinks 21.716     High  
cufflinks 22.654     High  
cufflinks 5.29       Low
cufflinks 12.425     High  
cufflinks 7.308       Low
cufflinks 11.391     High  
cufflinks 15.14     High  

0 Strain