Gene : Bradi2g43220 B. distachyon v3.1
Defline:  (1 of 66) PF01357 - Pollen allergen (Pollen_allerg_1) Genomic Order:  5186
Name:  ? Bradi2g43220 Secondary Identifier:  ? PAC:32771872
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g43220 0.5kb upstream 0.5kb upstream 1223 true Bd2: 43481910-43483132 Brachypodium distachyon
Bradi2g43220 0.5kb upstream 0.5kb upstream 500 false Bd2: 43482633-43483132 Brachypodium distachyon
Bradi2g43220 0.5kb downstream 0.5kb downstream 1223 true Bd2: 43481410-43482632 Brachypodium distachyon
Bradi2g43220 0.5kb downstream 0.5kb downstream 500 false Bd2: 43481410-43481909 Brachypodium distachyon
Bradi2g43220 1.0kb upstream 1.0kb upstream 1723 true Bd2: 43481910-43483632 Brachypodium distachyon
Bradi2g43220 1.0kb upstream 1.0kb upstream 1000 false Bd2: 43482633-43483632 Brachypodium distachyon
Bradi2g43220 1.0kb downstream 1.0kb downstream 1723 true Bd2: 43480910-43482632 Brachypodium distachyon
Bradi2g43220 1.0kb downstream 1.0kb downstream 1000 false Bd2: 43480910-43481909 Brachypodium distachyon
Bradi2g43220 2.0kb upstream 2.0kb upstream 2723 true Bd2: 43481910-43484632 Brachypodium distachyon
Bradi2g43220 2.0kb upstream 2.0kb upstream 2000 false Bd2: 43482633-43484632 Brachypodium distachyon
Bradi2g43220 2.0kb downstream 2.0kb downstream 2723 true Bd2: 43479910-43482632 Brachypodium distachyon
Bradi2g43220 2.0kb downstream 2.0kb downstream 2000 false Bd2: 43479910-43481909 Brachypodium distachyon
Bradi2g43220 5.0kb upstream 5.0kb upstream 5723 true Bd2: 43481910-43487632 Brachypodium distachyon
Bradi2g43220 5.0kb upstream 5.0kb upstream 5000 false Bd2: 43482633-43487632 Brachypodium distachyon
Bradi2g43220 5.0kb downstream 5.0kb downstream 5723 true Bd2: 43476910-43482632 Brachypodium distachyon
Bradi2g43220 5.0kb downstream 5.0kb downstream 5000 false Bd2: 43476910-43481909 Brachypodium distachyon
Bradi2g43220 10.0kb upstream 10.0kb upstream 10723 true Bd2: 43481910-43492632 Brachypodium distachyon
Bradi2g43220 10.0kb upstream 10.0kb upstream 10000 false Bd2: 43482633-43492632 Brachypodium distachyon
Bradi2g43220 10.0kb downstream 10.0kb downstream 10723 true Bd2: 43471910-43482632 Brachypodium distachyon
Bradi2g43220 10.0kb downstream 10.0kb downstream 10000 false Bd2: 43471910-43481909 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121996156 5273 Angiosperm View MSA
124590797 5269 Grass View MSA
121266324 5274 Embryophyte View MSA
123304666 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.167        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.209        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.105     Low  

0 Strain