Gene : Bradi2g43470 B. distachyon v3.1
Defline:  (1 of 1) PTHR12847:SF4 - ADAPTIN EAR-BINDING COAT-ASSOCIATED PROTEIN 1 NECAP-1 Genomic Order:  5216
Name:  ? Bradi2g43470 Secondary Identifier:  ? PAC:32782355
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g43470 0.5kb upstream 0.5kb upstream 4875 true Bd2: 43720889-43725763 Brachypodium distachyon
Bradi2g43470 0.5kb upstream 0.5kb upstream 500 false Bd2: 43720889-43721388 Brachypodium distachyon
Bradi2g43470 0.5kb downstream 0.5kb downstream 4875 true Bd2: 43721389-43726263 Brachypodium distachyon
Bradi2g43470 0.5kb downstream 0.5kb downstream 500 false Bd2: 43725764-43726263 Brachypodium distachyon
Bradi2g43470 1.0kb upstream 1.0kb upstream 5375 true Bd2: 43720389-43725763 Brachypodium distachyon
Bradi2g43470 1.0kb upstream 1.0kb upstream 1000 false Bd2: 43720389-43721388 Brachypodium distachyon
Bradi2g43470 1.0kb downstream 1.0kb downstream 5375 true Bd2: 43721389-43726763 Brachypodium distachyon
Bradi2g43470 1.0kb downstream 1.0kb downstream 1000 false Bd2: 43725764-43726763 Brachypodium distachyon
Bradi2g43470 2.0kb upstream 2.0kb upstream 6375 true Bd2: 43719389-43725763 Brachypodium distachyon
Bradi2g43470 2.0kb upstream 2.0kb upstream 2000 false Bd2: 43719389-43721388 Brachypodium distachyon
Bradi2g43470 2.0kb downstream 2.0kb downstream 6375 true Bd2: 43721389-43727763 Brachypodium distachyon
Bradi2g43470 2.0kb downstream 2.0kb downstream 2000 false Bd2: 43725764-43727763 Brachypodium distachyon
Bradi2g43470 5.0kb upstream 5.0kb upstream 9375 true Bd2: 43716389-43725763 Brachypodium distachyon
Bradi2g43470 5.0kb upstream 5.0kb upstream 5000 false Bd2: 43716389-43721388 Brachypodium distachyon
Bradi2g43470 5.0kb downstream 5.0kb downstream 9375 true Bd2: 43721389-43730763 Brachypodium distachyon
Bradi2g43470 5.0kb downstream 5.0kb downstream 5000 false Bd2: 43725764-43730763 Brachypodium distachyon
Bradi2g43470 10.0kb upstream 10.0kb upstream 14375 true Bd2: 43711389-43725763 Brachypodium distachyon
Bradi2g43470 10.0kb upstream 10.0kb upstream 10000 false Bd2: 43711389-43721388 Brachypodium distachyon
Bradi2g43470 10.0kb downstream 10.0kb downstream 14375 true Bd2: 43721389-43735763 Brachypodium distachyon
Bradi2g43470 10.0kb downstream 10.0kb downstream 10000 false Bd2: 43725764-43735763 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574312 5269 Grass View MSA
122043890 5273 Angiosperm View MSA
121345219 5274 Embryophyte View MSA
123428646 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.533        
cufflinks 6.187        
cufflinks 6.242        
cufflinks 5.554        
cufflinks 7.76        
cufflinks 5.735        
cufflinks 6.326        
cufflinks 6.384        
cufflinks 5.467        
cufflinks 4.344       Low
cufflinks 4.523        
cufflinks 6.733        
cufflinks 4.881        
cufflinks 3.636       Low
cufflinks 7.156        
cufflinks 5.903        
cufflinks 7.484        
cufflinks 12.23     High High
cufflinks 11.599       High
cufflinks 3.88       Low
cufflinks 8.895       High
cufflinks 5.624        
cufflinks 6.002        
cufflinks 5.893        
cufflinks 4.92        
cufflinks 5.065        
cufflinks 4.44        
cufflinks 5.132        
cufflinks 5.328        
cufflinks 9.277       High

0 Strain