Gene : Bradi2g43628 B. distachyon v3.1
Genomic Order:  5231 Name:  ? Bradi2g43628
Secondary Identifier:  ? PAC:32777561
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g43628 0.5kb upstream 0.5kb upstream 2485 true Bd2: 43849175-43851659 Brachypodium distachyon
Bradi2g43628 0.5kb upstream 0.5kb upstream 500 false Bd2: 43849175-43849674 Brachypodium distachyon
Bradi2g43628 0.5kb downstream 0.5kb downstream 2485 true Bd2: 43849675-43852159 Brachypodium distachyon
Bradi2g43628 0.5kb downstream 0.5kb downstream 500 false Bd2: 43851660-43852159 Brachypodium distachyon
Bradi2g43628 1.0kb upstream 1.0kb upstream 2985 true Bd2: 43848675-43851659 Brachypodium distachyon
Bradi2g43628 1.0kb upstream 1.0kb upstream 1000 false Bd2: 43848675-43849674 Brachypodium distachyon
Bradi2g43628 1.0kb downstream 1.0kb downstream 2985 true Bd2: 43849675-43852659 Brachypodium distachyon
Bradi2g43628 1.0kb downstream 1.0kb downstream 1000 false Bd2: 43851660-43852659 Brachypodium distachyon
Bradi2g43628 2.0kb upstream 2.0kb upstream 3985 true Bd2: 43847675-43851659 Brachypodium distachyon
Bradi2g43628 2.0kb upstream 2.0kb upstream 2000 false Bd2: 43847675-43849674 Brachypodium distachyon
Bradi2g43628 2.0kb downstream 2.0kb downstream 3985 true Bd2: 43849675-43853659 Brachypodium distachyon
Bradi2g43628 2.0kb downstream 2.0kb downstream 2000 false Bd2: 43851660-43853659 Brachypodium distachyon
Bradi2g43628 5.0kb upstream 5.0kb upstream 6985 true Bd2: 43844675-43851659 Brachypodium distachyon
Bradi2g43628 5.0kb upstream 5.0kb upstream 5000 false Bd2: 43844675-43849674 Brachypodium distachyon
Bradi2g43628 5.0kb downstream 5.0kb downstream 6985 true Bd2: 43849675-43856659 Brachypodium distachyon
Bradi2g43628 5.0kb downstream 5.0kb downstream 5000 false Bd2: 43851660-43856659 Brachypodium distachyon
Bradi2g43628 10.0kb upstream 10.0kb upstream 11985 true Bd2: 43839675-43851659 Brachypodium distachyon
Bradi2g43628 10.0kb upstream 10.0kb upstream 10000 false Bd2: 43839675-43849674 Brachypodium distachyon
Bradi2g43628 10.0kb downstream 10.0kb downstream 11985 true Bd2: 43849675-43861659 Brachypodium distachyon
Bradi2g43628 10.0kb downstream 10.0kb downstream 10000 false Bd2: 43851660-43861659 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124581221 5269 Grass View MSA
122049160 5273 Angiosperm View MSA
121311273 5274 Embryophyte View MSA
123348588 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.328        
cufflinks 0.359        
cufflinks 0.246        
cufflinks 0.285        
cufflinks 0.389        
cufflinks 0.26        
cufflinks 0.367        
cufflinks 0.361        
cufflinks 0.19        
cufflinks 0.456        
cufflinks 0.101       Low
cufflinks 0.176        
cufflinks 0.144        
cufflinks 0.149        
cufflinks 0.135        
cufflinks 0.359        
cufflinks 0.36        
cufflinks 0.623       High
cufflinks 0.468        
cufflinks 1.082       High
cufflinks 0.515        
cufflinks 0.417        
cufflinks 0.213        
cufflinks 0.165        
cufflinks 0.229        
cufflinks 0.413        
cufflinks 0.113       Low
cufflinks 0.35        
cufflinks 0.327        
cufflinks 0.475        

0 Strain