Gene : Bradi4g02970 B. distachyon v3.1
Defline:  (1 of 1) PTHR12419:SF10 - PROTEIN OTUB-3, ISOFORM B Genomic Order:  362
Name:  ? Bradi4g02970 Secondary Identifier:  ? PAC:32787379
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g02970 0.5kb upstream 0.5kb upstream 4347 true Bd4: 2212449-2216795 Brachypodium distachyon
Bradi4g02970 0.5kb upstream 0.5kb upstream 500 false Bd4: 2216296-2216795 Brachypodium distachyon
Bradi4g02970 0.5kb downstream 0.5kb downstream 4347 true Bd4: 2211949-2216295 Brachypodium distachyon
Bradi4g02970 0.5kb downstream 0.5kb downstream 500 false Bd4: 2211949-2212448 Brachypodium distachyon
Bradi4g02970 1.0kb upstream 1.0kb upstream 4847 true Bd4: 2212449-2217295 Brachypodium distachyon
Bradi4g02970 1.0kb upstream 1.0kb upstream 1000 false Bd4: 2216296-2217295 Brachypodium distachyon
Bradi4g02970 1.0kb downstream 1.0kb downstream 4847 true Bd4: 2211449-2216295 Brachypodium distachyon
Bradi4g02970 1.0kb downstream 1.0kb downstream 1000 false Bd4: 2211449-2212448 Brachypodium distachyon
Bradi4g02970 2.0kb upstream 2.0kb upstream 5847 true Bd4: 2212449-2218295 Brachypodium distachyon
Bradi4g02970 2.0kb upstream 2.0kb upstream 2000 false Bd4: 2216296-2218295 Brachypodium distachyon
Bradi4g02970 2.0kb downstream 2.0kb downstream 5847 true Bd4: 2210449-2216295 Brachypodium distachyon
Bradi4g02970 2.0kb downstream 2.0kb downstream 2000 false Bd4: 2210449-2212448 Brachypodium distachyon
Bradi4g02970 5.0kb upstream 5.0kb upstream 8847 true Bd4: 2212449-2221295 Brachypodium distachyon
Bradi4g02970 5.0kb upstream 5.0kb upstream 5000 false Bd4: 2216296-2221295 Brachypodium distachyon
Bradi4g02970 5.0kb downstream 5.0kb downstream 8847 true Bd4: 2207449-2216295 Brachypodium distachyon
Bradi4g02970 5.0kb downstream 5.0kb downstream 5000 false Bd4: 2207449-2212448 Brachypodium distachyon
Bradi4g02970 10.0kb upstream 10.0kb upstream 13847 true Bd4: 2212449-2226295 Brachypodium distachyon
Bradi4g02970 10.0kb upstream 10.0kb upstream 10000 false Bd4: 2216296-2226295 Brachypodium distachyon
Bradi4g02970 10.0kb downstream 10.0kb downstream 13847 true Bd4: 2202449-2216295 Brachypodium distachyon
Bradi4g02970 10.0kb downstream 10.0kb downstream 10000 false Bd4: 2202449-2212448 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570226 5269 Grass View MSA
122043014 5273 Angiosperm View MSA
121346407 5274 Embryophyte View MSA
123428461 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.369        
cufflinks 6.1        
cufflinks 7.917       High
cufflinks 5.508        
cufflinks 3.646       Low
cufflinks 5.528        
cufflinks 5.957        
cufflinks 5.0        
cufflinks 5.48        
cufflinks 5.206        
cufflinks 4.464        
cufflinks 5.645        
cufflinks 3.339       Low
cufflinks 3.8       Low
cufflinks 5.346        
cufflinks 6.346        
cufflinks 5.44        
cufflinks 8.544       High
cufflinks 8.442       High
cufflinks 6.491        
cufflinks 7.014        
cufflinks 6.878        
cufflinks 5.075        
cufflinks 4.818        
cufflinks 5.191        
cufflinks 7.178        
cufflinks 4.805        
cufflinks 8.262       High
cufflinks 7.777       High
cufflinks 6.759        

0 Strain