Gene : Bradi2g43840 B. distachyon v3.1
Genomic Order:  5258 Name:  ? Bradi2g43840
Secondary Identifier:  ? PAC:32772310
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g43840 0.5kb upstream 0.5kb upstream 1170 true Bd2: 44087831-44089000 Brachypodium distachyon
Bradi2g43840 0.5kb upstream 0.5kb upstream 500 false Bd2: 44087831-44088330 Brachypodium distachyon
Bradi2g43840 0.5kb downstream 0.5kb downstream 1170 true Bd2: 44088331-44089500 Brachypodium distachyon
Bradi2g43840 0.5kb downstream 0.5kb downstream 500 false Bd2: 44089001-44089500 Brachypodium distachyon
Bradi2g43840 1.0kb upstream 1.0kb upstream 1670 true Bd2: 44087331-44089000 Brachypodium distachyon
Bradi2g43840 1.0kb upstream 1.0kb upstream 1000 false Bd2: 44087331-44088330 Brachypodium distachyon
Bradi2g43840 1.0kb downstream 1.0kb downstream 1670 true Bd2: 44088331-44090000 Brachypodium distachyon
Bradi2g43840 1.0kb downstream 1.0kb downstream 1000 false Bd2: 44089001-44090000 Brachypodium distachyon
Bradi2g43840 2.0kb upstream 2.0kb upstream 2670 true Bd2: 44086331-44089000 Brachypodium distachyon
Bradi2g43840 2.0kb upstream 2.0kb upstream 2000 false Bd2: 44086331-44088330 Brachypodium distachyon
Bradi2g43840 2.0kb downstream 2.0kb downstream 2670 true Bd2: 44088331-44091000 Brachypodium distachyon
Bradi2g43840 2.0kb downstream 2.0kb downstream 2000 false Bd2: 44089001-44091000 Brachypodium distachyon
Bradi2g43840 5.0kb upstream 5.0kb upstream 5670 true Bd2: 44083331-44089000 Brachypodium distachyon
Bradi2g43840 5.0kb upstream 5.0kb upstream 5000 false Bd2: 44083331-44088330 Brachypodium distachyon
Bradi2g43840 5.0kb downstream 5.0kb downstream 5670 true Bd2: 44088331-44094000 Brachypodium distachyon
Bradi2g43840 5.0kb downstream 5.0kb downstream 5000 false Bd2: 44089001-44094000 Brachypodium distachyon
Bradi2g43840 10.0kb upstream 10.0kb upstream 10670 true Bd2: 44078331-44089000 Brachypodium distachyon
Bradi2g43840 10.0kb upstream 10.0kb upstream 10000 false Bd2: 44078331-44088330 Brachypodium distachyon
Bradi2g43840 10.0kb downstream 10.0kb downstream 10670 true Bd2: 44088331-44099000 Brachypodium distachyon
Bradi2g43840 10.0kb downstream 10.0kb downstream 10000 false Bd2: 44089001-44099000 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029230 5273 Angiosperm View MSA
124581303 5269 Grass View MSA
121298592 5274 Embryophyte View MSA
123336555 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.439        
cufflinks 1.788        
cufflinks 1.533        
cufflinks 3.466        
cufflinks 2.233        
cufflinks 0.748        
cufflinks 1.051        
cufflinks 2.025        
cufflinks 1.094        
cufflinks 5.98       High
cufflinks 0.184       Low
cufflinks 1.365        
cufflinks 1.895        
cufflinks 0.514        
cufflinks 3.408        
cufflinks 0.764        
cufflinks 1.9        
cufflinks 0.21       Low
cufflinks 3.064        
cufflinks 3.364        
cufflinks 1.524        
cufflinks 4.301        
cufflinks 1.447        
cufflinks 1.295        
cufflinks 1.953        
cufflinks 3.308        
cufflinks 0.226       Low
cufflinks 4.627       High
cufflinks 5.011       High
cufflinks 0.767        

0 Strain