Gene : Bradi4g04360 B. distachyon v3.1
Defline:  (1 of 1) PF10650 - Putative zinc-finger domain (zf-C3H1) Genomic Order:  557
Name:  ? Bradi4g04360 Secondary Identifier:  ? PAC:32787167
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g04360 0.5kb upstream 0.5kb upstream 10543 true Bd4: 3574078-3584620 Brachypodium distachyon
Bradi4g04360 0.5kb upstream 0.5kb upstream 500 false Bd4: 3584121-3584620 Brachypodium distachyon
Bradi4g04360 0.5kb downstream 0.5kb downstream 10543 true Bd4: 3573578-3584120 Brachypodium distachyon
Bradi4g04360 0.5kb downstream 0.5kb downstream 500 false Bd4: 3573578-3574077 Brachypodium distachyon
Bradi4g04360 1.0kb upstream 1.0kb upstream 11043 true Bd4: 3574078-3585120 Brachypodium distachyon
Bradi4g04360 1.0kb upstream 1.0kb upstream 1000 false Bd4: 3584121-3585120 Brachypodium distachyon
Bradi4g04360 1.0kb downstream 1.0kb downstream 11043 true Bd4: 3573078-3584120 Brachypodium distachyon
Bradi4g04360 1.0kb downstream 1.0kb downstream 1000 false Bd4: 3573078-3574077 Brachypodium distachyon
Bradi4g04360 2.0kb upstream 2.0kb upstream 12043 true Bd4: 3574078-3586120 Brachypodium distachyon
Bradi4g04360 2.0kb upstream 2.0kb upstream 2000 false Bd4: 3584121-3586120 Brachypodium distachyon
Bradi4g04360 2.0kb downstream 2.0kb downstream 12043 true Bd4: 3572078-3584120 Brachypodium distachyon
Bradi4g04360 2.0kb downstream 2.0kb downstream 2000 false Bd4: 3572078-3574077 Brachypodium distachyon
Bradi4g04360 5.0kb upstream 5.0kb upstream 15043 true Bd4: 3574078-3589120 Brachypodium distachyon
Bradi4g04360 5.0kb upstream 5.0kb upstream 5000 false Bd4: 3584121-3589120 Brachypodium distachyon
Bradi4g04360 5.0kb downstream 5.0kb downstream 15043 true Bd4: 3569078-3584120 Brachypodium distachyon
Bradi4g04360 5.0kb downstream 5.0kb downstream 5000 false Bd4: 3569078-3574077 Brachypodium distachyon
Bradi4g04360 10.0kb upstream 10.0kb upstream 20043 true Bd4: 3574078-3594120 Brachypodium distachyon
Bradi4g04360 10.0kb upstream 10.0kb upstream 10000 false Bd4: 3584121-3594120 Brachypodium distachyon
Bradi4g04360 10.0kb downstream 10.0kb downstream 20043 true Bd4: 3564078-3584120 Brachypodium distachyon
Bradi4g04360 10.0kb downstream 10.0kb downstream 10000 false Bd4: 3564078-3574077 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570038 5269 Grass View MSA
122048240 5273 Angiosperm View MSA
121310901 5274 Embryophyte View MSA
123348277 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.546       Low
cufflinks 1.643        
cufflinks 1.768        
cufflinks 1.108        
cufflinks 0.64       Low
cufflinks 1.437        
cufflinks 1.333        
cufflinks 1.214        
cufflinks 1.394        
cufflinks 0.907        
cufflinks 2.57       High
cufflinks 1.682        
cufflinks 1.528        
cufflinks 1.414        
cufflinks 0.755        
cufflinks 1.538        
cufflinks 0.554       Low
cufflinks 1.889        
cufflinks 1.033        
cufflinks 0.622       Low
cufflinks 0.734        
cufflinks 1.845        
cufflinks 1.129        
cufflinks 1.164        
cufflinks 1.117        
cufflinks 1.403        
cufflinks 1.896        
cufflinks 1.614        
cufflinks 1.497        
cufflinks 1.24        

0 Strain