Gene : Bradi4g04650 B. distachyon v3.1
Defline:  (1 of 1) PTHR15239//PTHR15239:SF6 - UNCHARACTERIZED // NUCLEAR EXPORT MEDIATOR FACTOR NEMF Genomic Order:  597
Name:  ? Bradi4g04650 Secondary Identifier:  ? PAC:32785419
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g04650 0.5kb upstream 0.5kb upstream 8185 true Bd4: 3819674-3827858 Brachypodium distachyon
Bradi4g04650 0.5kb upstream 0.5kb upstream 500 false Bd4: 3827359-3827858 Brachypodium distachyon
Bradi4g04650 0.5kb downstream 0.5kb downstream 8185 true Bd4: 3819174-3827358 Brachypodium distachyon
Bradi4g04650 0.5kb downstream 0.5kb downstream 500 false Bd4: 3819174-3819673 Brachypodium distachyon
Bradi4g04650 1.0kb upstream 1.0kb upstream 8685 true Bd4: 3819674-3828358 Brachypodium distachyon
Bradi4g04650 1.0kb upstream 1.0kb upstream 1000 false Bd4: 3827359-3828358 Brachypodium distachyon
Bradi4g04650 1.0kb downstream 1.0kb downstream 8685 true Bd4: 3818674-3827358 Brachypodium distachyon
Bradi4g04650 1.0kb downstream 1.0kb downstream 1000 false Bd4: 3818674-3819673 Brachypodium distachyon
Bradi4g04650 2.0kb upstream 2.0kb upstream 9685 true Bd4: 3819674-3829358 Brachypodium distachyon
Bradi4g04650 2.0kb upstream 2.0kb upstream 2000 false Bd4: 3827359-3829358 Brachypodium distachyon
Bradi4g04650 2.0kb downstream 2.0kb downstream 9685 true Bd4: 3817674-3827358 Brachypodium distachyon
Bradi4g04650 2.0kb downstream 2.0kb downstream 2000 false Bd4: 3817674-3819673 Brachypodium distachyon
Bradi4g04650 5.0kb upstream 5.0kb upstream 12685 true Bd4: 3819674-3832358 Brachypodium distachyon
Bradi4g04650 5.0kb upstream 5.0kb upstream 5000 false Bd4: 3827359-3832358 Brachypodium distachyon
Bradi4g04650 5.0kb downstream 5.0kb downstream 12685 true Bd4: 3814674-3827358 Brachypodium distachyon
Bradi4g04650 5.0kb downstream 5.0kb downstream 5000 false Bd4: 3814674-3819673 Brachypodium distachyon
Bradi4g04650 10.0kb upstream 10.0kb upstream 17685 true Bd4: 3819674-3837358 Brachypodium distachyon
Bradi4g04650 10.0kb upstream 10.0kb upstream 10000 false Bd4: 3827359-3837358 Brachypodium distachyon
Bradi4g04650 10.0kb downstream 10.0kb downstream 17685 true Bd4: 3809674-3827358 Brachypodium distachyon
Bradi4g04650 10.0kb downstream 10.0kb downstream 10000 false Bd4: 3809674-3819673 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577989 5269 Grass View MSA
122045064 5273 Angiosperm View MSA
121345152 5274 Embryophyte View MSA
123423931 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.341        
cufflinks 8.462        
cufflinks 10.63     High High
cufflinks 6.692        
cufflinks 3.97       Low
cufflinks 7.81        
cufflinks 6.987        
cufflinks 6.291        
cufflinks 7.177        
cufflinks 6.159        
cufflinks 9.61     High  
cufflinks 8.804        
cufflinks 7.737     High  
cufflinks 5.916        
cufflinks 5.894        
cufflinks 7.466        
cufflinks 5.155        
cufflinks 11.896     High High
cufflinks 6.703        
cufflinks 5.157        
cufflinks 5.766        
cufflinks 10.266     High High
cufflinks 6.453        
cufflinks 6.494        
cufflinks 6.252        
cufflinks 9.436        
cufflinks 9.1     High  
cufflinks 9.372        
cufflinks 9.163        
cufflinks 8.676        

0 Strain