Gene : Bradi2g44070 B. distachyon v3.1
Defline:  (1 of 1) PTHR11134:SF4 - AP-4 COMPLEX SUBUNIT BETA-1 Genomic Order:  5288
Name:  ? Bradi2g44070 Secondary Identifier:  ? PAC:32773545
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g44070 0.5kb upstream 0.5kb upstream 8539 true Bd2: 44329544-44338082 Brachypodium distachyon
Bradi2g44070 0.5kb upstream 0.5kb upstream 500 false Bd2: 44329544-44330043 Brachypodium distachyon
Bradi2g44070 0.5kb downstream 0.5kb downstream 8539 true Bd2: 44330044-44338582 Brachypodium distachyon
Bradi2g44070 0.5kb downstream 0.5kb downstream 500 false Bd2: 44338083-44338582 Brachypodium distachyon
Bradi2g44070 1.0kb upstream 1.0kb upstream 9039 true Bd2: 44329044-44338082 Brachypodium distachyon
Bradi2g44070 1.0kb upstream 1.0kb upstream 1000 false Bd2: 44329044-44330043 Brachypodium distachyon
Bradi2g44070 1.0kb downstream 1.0kb downstream 9039 true Bd2: 44330044-44339082 Brachypodium distachyon
Bradi2g44070 1.0kb downstream 1.0kb downstream 1000 false Bd2: 44338083-44339082 Brachypodium distachyon
Bradi2g44070 2.0kb upstream 2.0kb upstream 10039 true Bd2: 44328044-44338082 Brachypodium distachyon
Bradi2g44070 2.0kb upstream 2.0kb upstream 2000 false Bd2: 44328044-44330043 Brachypodium distachyon
Bradi2g44070 2.0kb downstream 2.0kb downstream 10039 true Bd2: 44330044-44340082 Brachypodium distachyon
Bradi2g44070 2.0kb downstream 2.0kb downstream 2000 false Bd2: 44338083-44340082 Brachypodium distachyon
Bradi2g44070 5.0kb upstream 5.0kb upstream 13039 true Bd2: 44325044-44338082 Brachypodium distachyon
Bradi2g44070 5.0kb upstream 5.0kb upstream 5000 false Bd2: 44325044-44330043 Brachypodium distachyon
Bradi2g44070 5.0kb downstream 5.0kb downstream 13039 true Bd2: 44330044-44343082 Brachypodium distachyon
Bradi2g44070 5.0kb downstream 5.0kb downstream 5000 false Bd2: 44338083-44343082 Brachypodium distachyon
Bradi2g44070 10.0kb upstream 10.0kb upstream 18039 true Bd2: 44320044-44338082 Brachypodium distachyon
Bradi2g44070 10.0kb upstream 10.0kb upstream 10000 false Bd2: 44320044-44330043 Brachypodium distachyon
Bradi2g44070 10.0kb downstream 10.0kb downstream 18039 true Bd2: 44330044-44348082 Brachypodium distachyon
Bradi2g44070 10.0kb downstream 10.0kb downstream 10000 false Bd2: 44338083-44348082 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040917 5273 Angiosperm View MSA
124586045 5269 Grass View MSA
121346542 5274 Embryophyte View MSA
123428647 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.399        
cufflinks 8.864        
cufflinks 9.362        
cufflinks 6.908        
cufflinks 5.294        
cufflinks 7.899        
cufflinks 7.541        
cufflinks 7.149        
cufflinks 7.676        
cufflinks 5.168        
cufflinks 5.523        
cufflinks 8.226        
cufflinks 3.811       Low
cufflinks 3.738       Low
cufflinks 4.628        
cufflinks 8.432        
cufflinks 5.258        
cufflinks 15.809     High High
cufflinks 9.532        
cufflinks 3.999       Low
cufflinks 8.655        
cufflinks 9.007        
cufflinks 7.232        
cufflinks 7.134        
cufflinks 6.393        
cufflinks 7.734        
cufflinks 5.024        
cufflinks 7.731        
cufflinks 7.597        
cufflinks 11.484     High High

0 Strain