Gene : Bradi4g06380 B. distachyon v3.1
Defline:  (1 of 1) PTHR12460:SF4 - ENTH/VHS FAMILY PROTEIN Genomic Order:  830
Name:  ? Bradi4g06380 Secondary Identifier:  ? PAC:32790306
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g06380 0.5kb upstream 0.5kb upstream 5839 true Bd4: 5348296-5354134 Brachypodium distachyon
Bradi4g06380 0.5kb upstream 0.5kb upstream 500 false Bd4: 5353635-5354134 Brachypodium distachyon
Bradi4g06380 0.5kb downstream 0.5kb downstream 5839 true Bd4: 5347796-5353634 Brachypodium distachyon
Bradi4g06380 0.5kb downstream 0.5kb downstream 500 false Bd4: 5347796-5348295 Brachypodium distachyon
Bradi4g06380 1.0kb upstream 1.0kb upstream 6339 true Bd4: 5348296-5354634 Brachypodium distachyon
Bradi4g06380 1.0kb upstream 1.0kb upstream 1000 false Bd4: 5353635-5354634 Brachypodium distachyon
Bradi4g06380 1.0kb downstream 1.0kb downstream 6339 true Bd4: 5347296-5353634 Brachypodium distachyon
Bradi4g06380 1.0kb downstream 1.0kb downstream 1000 false Bd4: 5347296-5348295 Brachypodium distachyon
Bradi4g06380 2.0kb upstream 2.0kb upstream 7339 true Bd4: 5348296-5355634 Brachypodium distachyon
Bradi4g06380 2.0kb upstream 2.0kb upstream 2000 false Bd4: 5353635-5355634 Brachypodium distachyon
Bradi4g06380 2.0kb downstream 2.0kb downstream 7339 true Bd4: 5346296-5353634 Brachypodium distachyon
Bradi4g06380 2.0kb downstream 2.0kb downstream 2000 false Bd4: 5346296-5348295 Brachypodium distachyon
Bradi4g06380 5.0kb upstream 5.0kb upstream 10339 true Bd4: 5348296-5358634 Brachypodium distachyon
Bradi4g06380 5.0kb upstream 5.0kb upstream 5000 false Bd4: 5353635-5358634 Brachypodium distachyon
Bradi4g06380 5.0kb downstream 5.0kb downstream 10339 true Bd4: 5343296-5353634 Brachypodium distachyon
Bradi4g06380 5.0kb downstream 5.0kb downstream 5000 false Bd4: 5343296-5348295 Brachypodium distachyon
Bradi4g06380 10.0kb upstream 10.0kb upstream 15339 true Bd4: 5348296-5363634 Brachypodium distachyon
Bradi4g06380 10.0kb upstream 10.0kb upstream 10000 false Bd4: 5353635-5363634 Brachypodium distachyon
Bradi4g06380 10.0kb downstream 10.0kb downstream 15339 true Bd4: 5338296-5353634 Brachypodium distachyon
Bradi4g06380 10.0kb downstream 10.0kb downstream 10000 false Bd4: 5338296-5348295 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579847 5269 Grass View MSA
122049571 5273 Angiosperm View MSA
123428880 5275 Viridiplantae View MSA
121348039 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.704        
cufflinks 0.889        
cufflinks 0.815        
cufflinks 0.683        
cufflinks 0.387       Low
cufflinks 0.798        
cufflinks 0.804        
cufflinks 0.695        
cufflinks 0.778        
cufflinks 0.436        
cufflinks 0.544        
cufflinks 0.743        
cufflinks 0.429        
cufflinks 0.404       Low
cufflinks 0.541        
cufflinks 0.89        
cufflinks 0.496        
cufflinks 1.49       High
cufflinks 0.593        
cufflinks 0.246       Low
cufflinks 0.648        
cufflinks 0.783        
cufflinks 0.679        
cufflinks 0.641        
cufflinks 0.682        
cufflinks 0.676        
cufflinks 0.658        
cufflinks 0.699        
cufflinks 0.707        
cufflinks 0.892        

0 Strain