Gene : Bradi4g06370 B. distachyon v3.1
Defline:  (1 of 4) K09487 - heat shock protein 90kDa beta (HSP90B, TRA1) Genomic Order:  826
Name:  ? Bradi4g06370 Secondary Identifier:  ? PAC:32784903
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g06370 0.5kb upstream 0.5kb upstream 6811 true Bd4: 5329559-5336369 Brachypodium distachyon
Bradi4g06370 0.5kb upstream 0.5kb upstream 500 false Bd4: 5329559-5330058 Brachypodium distachyon
Bradi4g06370 0.5kb downstream 0.5kb downstream 6811 true Bd4: 5330059-5336869 Brachypodium distachyon
Bradi4g06370 0.5kb downstream 0.5kb downstream 500 false Bd4: 5336370-5336869 Brachypodium distachyon
Bradi4g06370 1.0kb upstream 1.0kb upstream 7311 true Bd4: 5329059-5336369 Brachypodium distachyon
Bradi4g06370 1.0kb upstream 1.0kb upstream 1000 false Bd4: 5329059-5330058 Brachypodium distachyon
Bradi4g06370 1.0kb downstream 1.0kb downstream 7311 true Bd4: 5330059-5337369 Brachypodium distachyon
Bradi4g06370 1.0kb downstream 1.0kb downstream 1000 false Bd4: 5336370-5337369 Brachypodium distachyon
Bradi4g06370 2.0kb upstream 2.0kb upstream 8311 true Bd4: 5328059-5336369 Brachypodium distachyon
Bradi4g06370 2.0kb upstream 2.0kb upstream 2000 false Bd4: 5328059-5330058 Brachypodium distachyon
Bradi4g06370 2.0kb downstream 2.0kb downstream 8311 true Bd4: 5330059-5338369 Brachypodium distachyon
Bradi4g06370 2.0kb downstream 2.0kb downstream 2000 false Bd4: 5336370-5338369 Brachypodium distachyon
Bradi4g06370 5.0kb upstream 5.0kb upstream 11311 true Bd4: 5325059-5336369 Brachypodium distachyon
Bradi4g06370 5.0kb upstream 5.0kb upstream 5000 false Bd4: 5325059-5330058 Brachypodium distachyon
Bradi4g06370 5.0kb downstream 5.0kb downstream 11311 true Bd4: 5330059-5341369 Brachypodium distachyon
Bradi4g06370 5.0kb downstream 5.0kb downstream 5000 false Bd4: 5336370-5341369 Brachypodium distachyon
Bradi4g06370 10.0kb upstream 10.0kb upstream 16311 true Bd4: 5320059-5336369 Brachypodium distachyon
Bradi4g06370 10.0kb upstream 10.0kb upstream 10000 false Bd4: 5320059-5330058 Brachypodium distachyon
Bradi4g06370 10.0kb downstream 10.0kb downstream 16311 true Bd4: 5330059-5346369 Brachypodium distachyon
Bradi4g06370 10.0kb downstream 10.0kb downstream 10000 false Bd4: 5336370-5346369 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574402 5269 Grass View MSA
122044795 5273 Angiosperm View MSA
121310342 5274 Embryophyte View MSA
123428204 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.839        
cufflinks 14.976     High  
cufflinks 10.777     High  
cufflinks 11.603     High  
cufflinks 5.3        
cufflinks 13.028     High  
cufflinks 13.054     High  
cufflinks 10.984     High  
cufflinks 12.452     High  
cufflinks 4.924        
cufflinks 7.256        
cufflinks 11.647     High  
cufflinks 3.78       Low
cufflinks 5.324        
cufflinks 4.721       Low
cufflinks 13.752     High  
cufflinks 8.343        
cufflinks 23.78     High High
cufflinks 7.216        
cufflinks 2.229       Low
cufflinks 7.165        
cufflinks 7.896        
cufflinks 11.222     High  
cufflinks 11.063     High  
cufflinks 12.651     High  
cufflinks 7.717        
cufflinks 5.802        
cufflinks 6.25        
cufflinks 6.23        
cufflinks 10.331        

0 Strain