Gene : Bradi2g45330 B. distachyon v3.1
Defline:  (1 of 2) 1.1.1.86 - Ketol-acid reductoisomerase (NADP(+)) / Dihydroxyisovalerate dehydrogenase (isomerizing) Genomic Order:  5419
Name:  ? Bradi2g45330 Secondary Identifier:  ? PAC:32776221
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon BRANCHED-CHAIN-AA-SYN-PWY Brachypodium distachyon pathologic  
Bdistachyon ILEUSYN-PWY Brachypodium distachyon pathologic  
Bdistachyon PWY-3001 Brachypodium distachyon pathologic  
Bdistachyon VALSYN-PWY Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g45330 0.5kb upstream 0.5kb upstream 4850 true Bd2: 45479770-45484619 Brachypodium distachyon
Bradi2g45330 0.5kb upstream 0.5kb upstream 500 false Bd2: 45479770-45480269 Brachypodium distachyon
Bradi2g45330 0.5kb downstream 0.5kb downstream 4850 true Bd2: 45480270-45485119 Brachypodium distachyon
Bradi2g45330 0.5kb downstream 0.5kb downstream 500 false Bd2: 45484620-45485119 Brachypodium distachyon
Bradi2g45330 1.0kb upstream 1.0kb upstream 5350 true Bd2: 45479270-45484619 Brachypodium distachyon
Bradi2g45330 1.0kb upstream 1.0kb upstream 1000 false Bd2: 45479270-45480269 Brachypodium distachyon
Bradi2g45330 1.0kb downstream 1.0kb downstream 5350 true Bd2: 45480270-45485619 Brachypodium distachyon
Bradi2g45330 1.0kb downstream 1.0kb downstream 1000 false Bd2: 45484620-45485619 Brachypodium distachyon
Bradi2g45330 2.0kb upstream 2.0kb upstream 6350 true Bd2: 45478270-45484619 Brachypodium distachyon
Bradi2g45330 2.0kb upstream 2.0kb upstream 2000 false Bd2: 45478270-45480269 Brachypodium distachyon
Bradi2g45330 2.0kb downstream 2.0kb downstream 6350 true Bd2: 45480270-45486619 Brachypodium distachyon
Bradi2g45330 2.0kb downstream 2.0kb downstream 2000 false Bd2: 45484620-45486619 Brachypodium distachyon
Bradi2g45330 5.0kb upstream 5.0kb upstream 9350 true Bd2: 45475270-45484619 Brachypodium distachyon
Bradi2g45330 5.0kb upstream 5.0kb upstream 5000 false Bd2: 45475270-45480269 Brachypodium distachyon
Bradi2g45330 5.0kb downstream 5.0kb downstream 9350 true Bd2: 45480270-45489619 Brachypodium distachyon
Bradi2g45330 5.0kb downstream 5.0kb downstream 5000 false Bd2: 45484620-45489619 Brachypodium distachyon
Bradi2g45330 10.0kb upstream 10.0kb upstream 14350 true Bd2: 45470270-45484619 Brachypodium distachyon
Bradi2g45330 10.0kb upstream 10.0kb upstream 10000 false Bd2: 45470270-45480269 Brachypodium distachyon
Bradi2g45330 10.0kb downstream 10.0kb downstream 14350 true Bd2: 45480270-45494619 Brachypodium distachyon
Bradi2g45330 10.0kb downstream 10.0kb downstream 10000 false Bd2: 45484620-45494619 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582762 5269 Grass View MSA
122043531 5273 Angiosperm View MSA
121344443 5274 Embryophyte View MSA
123428276 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.899     High Low
cufflinks 40.171     High  
cufflinks 35.763     High  
cufflinks 34.617     High  
cufflinks 29.855     High  
cufflinks 34.344     High  
cufflinks 35.438     High  
cufflinks 24.203     High  
cufflinks 29.68     High  
cufflinks 22.308     High  
cufflinks 32.304     High  
cufflinks 30.109     High  
cufflinks 24.549     High  
cufflinks 24.506     High  
cufflinks 15.645     High Low
cufflinks 29.372     High  
cufflinks 24.734     High  
cufflinks 53.44     High High
cufflinks 37.577     High  
cufflinks 24.146     High  
cufflinks 26.9     High  
cufflinks 30.845     High  
cufflinks 24.347     High  
cufflinks 24.962     High  
cufflinks 28.37     High  
cufflinks 31.526     High  
cufflinks 23.381     High  
cufflinks 30.0     High  
cufflinks 29.024     High  
cufflinks 34.466     High  

0 Strain