Gene : Bradi2g41560 B. distachyon v3.1
Defline:  (1 of 2) PTHR14503:SF3 - 50S RIBOSOMAL PROTEIN L34, CHLOROPLASTIC Genomic Order:  4963
Name:  ? Bradi2g41560 Secondary Identifier:  ? PAC:32771758
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g41560 0.5kb upstream 0.5kb upstream 4136 true Bd2: 41577285-41581420 Brachypodium distachyon
Bradi2g41560 0.5kb upstream 0.5kb upstream 500 false Bd2: 41580921-41581420 Brachypodium distachyon
Bradi2g41560 0.5kb downstream 0.5kb downstream 4136 true Bd2: 41576785-41580920 Brachypodium distachyon
Bradi2g41560 0.5kb downstream 0.5kb downstream 500 false Bd2: 41576785-41577284 Brachypodium distachyon
Bradi2g41560 1.0kb upstream 1.0kb upstream 4636 true Bd2: 41577285-41581920 Brachypodium distachyon
Bradi2g41560 1.0kb upstream 1.0kb upstream 1000 false Bd2: 41580921-41581920 Brachypodium distachyon
Bradi2g41560 1.0kb downstream 1.0kb downstream 4636 true Bd2: 41576285-41580920 Brachypodium distachyon
Bradi2g41560 1.0kb downstream 1.0kb downstream 1000 false Bd2: 41576285-41577284 Brachypodium distachyon
Bradi2g41560 2.0kb upstream 2.0kb upstream 5636 true Bd2: 41577285-41582920 Brachypodium distachyon
Bradi2g41560 2.0kb upstream 2.0kb upstream 2000 false Bd2: 41580921-41582920 Brachypodium distachyon
Bradi2g41560 2.0kb downstream 2.0kb downstream 5636 true Bd2: 41575285-41580920 Brachypodium distachyon
Bradi2g41560 2.0kb downstream 2.0kb downstream 2000 false Bd2: 41575285-41577284 Brachypodium distachyon
Bradi2g41560 5.0kb upstream 5.0kb upstream 8636 true Bd2: 41577285-41585920 Brachypodium distachyon
Bradi2g41560 5.0kb upstream 5.0kb upstream 5000 false Bd2: 41580921-41585920 Brachypodium distachyon
Bradi2g41560 5.0kb downstream 5.0kb downstream 8636 true Bd2: 41572285-41580920 Brachypodium distachyon
Bradi2g41560 5.0kb downstream 5.0kb downstream 5000 false Bd2: 41572285-41577284 Brachypodium distachyon
Bradi2g41560 10.0kb upstream 10.0kb upstream 13636 true Bd2: 41577285-41590920 Brachypodium distachyon
Bradi2g41560 10.0kb upstream 10.0kb upstream 10000 false Bd2: 41580921-41590920 Brachypodium distachyon
Bradi2g41560 10.0kb downstream 10.0kb downstream 13636 true Bd2: 41567285-41580920 Brachypodium distachyon
Bradi2g41560 10.0kb downstream 10.0kb downstream 10000 false Bd2: 41567285-41577284 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124588773 5269 Grass View MSA
122044582 5273 Angiosperm View MSA
121344313 5274 Embryophyte View MSA
123425891 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 59.821     High High
cufflinks 46.18     High  
cufflinks 40.176     High  
cufflinks 49.317     High  
cufflinks 29.059     High  
cufflinks 38.625     High  
cufflinks 49.839     High  
cufflinks 35.852     High  
cufflinks 33.497     High  
cufflinks 43.959     High  
cufflinks 13.242     High  
cufflinks 36.043     High  
cufflinks 19.385     High  
cufflinks 17.942     High  
cufflinks 38.418     High  
cufflinks 44.805     High  
cufflinks 59.148     High High
cufflinks 4.53       Low
cufflinks 42.852     High  
cufflinks 3.558       Low
cufflinks 27.309     High  
cufflinks 35.451     High  
cufflinks 29.632     High  
cufflinks 31.223     High  
cufflinks 38.243     High  
cufflinks 40.753     High  
cufflinks 13.343     High  
cufflinks 41.771     High  
cufflinks 42.744     High  
cufflinks 44.683     High  

0 Strain