Gene : Bradi4g45037 B. distachyon v3.1
Defline:  (1 of 5) PF11960 - Domain of unknown function (DUF3474) (DUF3474) Genomic Order:  5810
Name:  ? Bradi4g45037 Secondary Identifier:  ? PAC:32783109
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g45037 0.5kb upstream 0.5kb upstream 4763 true Bd4: 48185912-48190674 Brachypodium distachyon
Bradi4g45037 0.5kb upstream 0.5kb upstream 500 false Bd4: 48185912-48186411 Brachypodium distachyon
Bradi4g45037 0.5kb downstream 0.5kb downstream 4763 true Bd4: 48186412-48191174 Brachypodium distachyon
Bradi4g45037 0.5kb downstream 0.5kb downstream 500 false Bd4: 48190675-48191174 Brachypodium distachyon
Bradi4g45037 1.0kb upstream 1.0kb upstream 5263 true Bd4: 48185412-48190674 Brachypodium distachyon
Bradi4g45037 1.0kb upstream 1.0kb upstream 1000 false Bd4: 48185412-48186411 Brachypodium distachyon
Bradi4g45037 1.0kb downstream 1.0kb downstream 5263 true Bd4: 48186412-48191674 Brachypodium distachyon
Bradi4g45037 1.0kb downstream 1.0kb downstream 1000 false Bd4: 48190675-48191674 Brachypodium distachyon
Bradi4g45037 2.0kb upstream 2.0kb upstream 6263 true Bd4: 48184412-48190674 Brachypodium distachyon
Bradi4g45037 2.0kb upstream 2.0kb upstream 2000 false Bd4: 48184412-48186411 Brachypodium distachyon
Bradi4g45037 2.0kb downstream 2.0kb downstream 6263 true Bd4: 48186412-48192674 Brachypodium distachyon
Bradi4g45037 2.0kb downstream 2.0kb downstream 2000 false Bd4: 48190675-48192674 Brachypodium distachyon
Bradi4g45037 5.0kb upstream 5.0kb upstream 9263 true Bd4: 48181412-48190674 Brachypodium distachyon
Bradi4g45037 5.0kb upstream 5.0kb upstream 5000 false Bd4: 48181412-48186411 Brachypodium distachyon
Bradi4g45037 5.0kb downstream 5.0kb downstream 9263 true Bd4: 48186412-48195674 Brachypodium distachyon
Bradi4g45037 5.0kb downstream 5.0kb downstream 5000 false Bd4: 48190675-48195674 Brachypodium distachyon
Bradi4g45037 10.0kb upstream 10.0kb upstream 14263 true Bd4: 48176412-48190674 Brachypodium distachyon
Bradi4g45037 10.0kb upstream 10.0kb upstream 10000 false Bd4: 48176412-48186411 Brachypodium distachyon
Bradi4g45037 10.0kb downstream 10.0kb downstream 14263 true Bd4: 48186412-48200674 Brachypodium distachyon
Bradi4g45037 10.0kb downstream 10.0kb downstream 10000 false Bd4: 48190675-48200674 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122019953 5273 Angiosperm View MSA
124581434 5269 Grass View MSA
121351532 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 95.683     High High
cufflinks 31.145     High  
cufflinks 22.748     High  
cufflinks 33.827     High  
cufflinks 21.861     High  
cufflinks 32.227     High  
cufflinks 26.161     High  
cufflinks 37.576     High  
cufflinks 34.809     High  
cufflinks 33.466     High  
cufflinks 2.176       Low
cufflinks 26.327     High  
cufflinks 12.983     High  
cufflinks 5.856       Low
cufflinks 43.749     High  
cufflinks 35.736     High  
cufflinks 34.198     High  
cufflinks 33.32     High  
cufflinks 20.512     High  
cufflinks 8.22       Low
cufflinks 35.357     High  
cufflinks 36.797     High  
cufflinks 39.646     High  
cufflinks 43.956     High  
cufflinks 34.806     High  
cufflinks 22.13     High  
cufflinks 6.175       Low
cufflinks 21.729     High  
cufflinks 27.009     High  
cufflinks 37.994     High  

0 Strain