Gene : Bradi4g00200 B. distachyon v3.1
Defline:  (1 of 2) PTHR24423//PTHR24423:SF515 - TWO-COMPONENT SENSOR HISTIDINE KINASE // SUBFAMILY NOT NAMED Genomic Order:  2
Name:  ? Bradi4g00200 Secondary Identifier:  ? PAC:32790633
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g00200 0.5kb upstream 0.5kb upstream 4825 true Bd4: 19179-24003 Brachypodium distachyon
Bradi4g00200 0.5kb upstream 0.5kb upstream 500 false Bd4: 19179-19678 Brachypodium distachyon
Bradi4g00200 0.5kb downstream 0.5kb downstream 4825 true Bd4: 19679-24503 Brachypodium distachyon
Bradi4g00200 0.5kb downstream 0.5kb downstream 500 false Bd4: 24004-24503 Brachypodium distachyon
Bradi4g00200 1.0kb upstream 1.0kb upstream 5325 true Bd4: 18679-24003 Brachypodium distachyon
Bradi4g00200 1.0kb upstream 1.0kb upstream 1000 false Bd4: 18679-19678 Brachypodium distachyon
Bradi4g00200 1.0kb downstream 1.0kb downstream 5325 true Bd4: 19679-25003 Brachypodium distachyon
Bradi4g00200 1.0kb downstream 1.0kb downstream 1000 false Bd4: 24004-25003 Brachypodium distachyon
Bradi4g00200 2.0kb upstream 2.0kb upstream 6325 true Bd4: 17679-24003 Brachypodium distachyon
Bradi4g00200 2.0kb upstream 2.0kb upstream 2000 false Bd4: 17679-19678 Brachypodium distachyon
Bradi4g00200 2.0kb downstream 2.0kb downstream 6325 true Bd4: 19679-26003 Brachypodium distachyon
Bradi4g00200 2.0kb downstream 2.0kb downstream 2000 false Bd4: 24004-26003 Brachypodium distachyon
Bradi4g00200 5.0kb upstream 5.0kb upstream 9325 true Bd4: 14679-24003 Brachypodium distachyon
Bradi4g00200 5.0kb upstream 5.0kb upstream 5000 false Bd4: 14679-19678 Brachypodium distachyon
Bradi4g00200 5.0kb downstream 5.0kb downstream 9325 true Bd4: 19679-29003 Brachypodium distachyon
Bradi4g00200 5.0kb downstream 5.0kb downstream 5000 false Bd4: 24004-29003 Brachypodium distachyon
Bradi4g00200 10.0kb upstream 10.0kb upstream 14325 true Bd4: 9679-24003 Brachypodium distachyon
Bradi4g00200 10.0kb upstream 10.0kb upstream 10000 false Bd4: 9679-19678 Brachypodium distachyon
Bradi4g00200 10.0kb downstream 10.0kb downstream 14325 true Bd4: 19679-34003 Brachypodium distachyon
Bradi4g00200 10.0kb downstream 10.0kb downstream 10000 false Bd4: 24004-34003 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124545533 5269 Grass View MSA
122046437 5273 Angiosperm View MSA
123429048 5275 Viridiplantae View MSA
121350993 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.337       Low
cufflinks 0.927        
cufflinks 1.036        
cufflinks 0.733        
cufflinks 0.454        
cufflinks 0.832        
cufflinks 0.897        
cufflinks 0.647        
cufflinks 0.766        
cufflinks 0.467        
cufflinks 0.459        
cufflinks 0.891        
cufflinks 0.505        
cufflinks 0.324       Low
cufflinks 0.479        
cufflinks 0.842        
cufflinks 0.448        
cufflinks 2.436       High
cufflinks 0.774        
cufflinks 0.392       Low
cufflinks 1.204       High
cufflinks 0.675        
cufflinks 0.612        
cufflinks 0.721        
cufflinks 0.595        
cufflinks 0.821        
cufflinks 0.657        
cufflinks 0.842        
cufflinks 0.66        
cufflinks 1.372       High

0 Strain