Gene : Bradi2g42270 B. distachyon v3.1
Genomic Order:  5059 Name:  ? Bradi2g42270
Secondary Identifier:  ? PAC:32781794
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g42270 0.5kb upstream 0.5kb upstream 2964 true Bd2: 42506981-42509944 Brachypodium distachyon
Bradi2g42270 0.5kb upstream 0.5kb upstream 500 false Bd2: 42509445-42509944 Brachypodium distachyon
Bradi2g42270 0.5kb downstream 0.5kb downstream 2964 true Bd2: 42506481-42509444 Brachypodium distachyon
Bradi2g42270 0.5kb downstream 0.5kb downstream 500 false Bd2: 42506481-42506980 Brachypodium distachyon
Bradi2g42270 1.0kb upstream 1.0kb upstream 3464 true Bd2: 42506981-42510444 Brachypodium distachyon
Bradi2g42270 1.0kb upstream 1.0kb upstream 1000 false Bd2: 42509445-42510444 Brachypodium distachyon
Bradi2g42270 1.0kb downstream 1.0kb downstream 3464 true Bd2: 42505981-42509444 Brachypodium distachyon
Bradi2g42270 1.0kb downstream 1.0kb downstream 1000 false Bd2: 42505981-42506980 Brachypodium distachyon
Bradi2g42270 2.0kb upstream 2.0kb upstream 4464 true Bd2: 42506981-42511444 Brachypodium distachyon
Bradi2g42270 2.0kb upstream 2.0kb upstream 2000 false Bd2: 42509445-42511444 Brachypodium distachyon
Bradi2g42270 2.0kb downstream 2.0kb downstream 4464 true Bd2: 42504981-42509444 Brachypodium distachyon
Bradi2g42270 2.0kb downstream 2.0kb downstream 2000 false Bd2: 42504981-42506980 Brachypodium distachyon
Bradi2g42270 5.0kb upstream 5.0kb upstream 7464 true Bd2: 42506981-42514444 Brachypodium distachyon
Bradi2g42270 5.0kb upstream 5.0kb upstream 5000 false Bd2: 42509445-42514444 Brachypodium distachyon
Bradi2g42270 5.0kb downstream 5.0kb downstream 7464 true Bd2: 42501981-42509444 Brachypodium distachyon
Bradi2g42270 5.0kb downstream 5.0kb downstream 5000 false Bd2: 42501981-42506980 Brachypodium distachyon
Bradi2g42270 10.0kb upstream 10.0kb upstream 12464 true Bd2: 42506981-42519444 Brachypodium distachyon
Bradi2g42270 10.0kb upstream 10.0kb upstream 10000 false Bd2: 42509445-42519444 Brachypodium distachyon
Bradi2g42270 10.0kb downstream 10.0kb downstream 12464 true Bd2: 42496981-42509444 Brachypodium distachyon
Bradi2g42270 10.0kb downstream 10.0kb downstream 10000 false Bd2: 42496981-42506980 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124588679 5269 Grass View MSA
122042623 5273 Angiosperm View MSA
121349599 5274 Embryophyte View MSA
123428775 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.499        
cufflinks 7.741        
cufflinks 9.065        
cufflinks 7.683        
cufflinks 5.25       Low
cufflinks 7.035        
cufflinks 7.754        
cufflinks 7.118        
cufflinks 6.936        
cufflinks 8.582        
cufflinks 6.695        
cufflinks 5.891        
cufflinks 6.603        
cufflinks 5.868        
cufflinks 6.616        
cufflinks 7.742        
cufflinks 8.066        
cufflinks 11.773     High High
cufflinks 10.895       High
cufflinks 3.107       Low
cufflinks 13.831     High High
cufflinks 7.79        
cufflinks 6.63        
cufflinks 6.35        
cufflinks 6.743        
cufflinks 9.848        
cufflinks 7.009        
cufflinks 9.688        
cufflinks 8.633        
cufflinks 9.563        

0 Strain