Gene : Bradi4g00517 B. distachyon v3.1
Defline:  (1 of 2) PTHR24093:SF264 - ATPASE 4, PLASMA MEMBRANE-TYPE Genomic Order:  43
Name:  ? Bradi4g00517 Secondary Identifier:  ? PAC:32790397
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g00517 0.5kb upstream 0.5kb upstream 6554 true Bd4: 229055-235608 Brachypodium distachyon
Bradi4g00517 0.5kb upstream 0.5kb upstream 500 false Bd4: 235109-235608 Brachypodium distachyon
Bradi4g00517 0.5kb downstream 0.5kb downstream 6554 true Bd4: 228555-235108 Brachypodium distachyon
Bradi4g00517 0.5kb downstream 0.5kb downstream 500 false Bd4: 228555-229054 Brachypodium distachyon
Bradi4g00517 1.0kb upstream 1.0kb upstream 7054 true Bd4: 229055-236108 Brachypodium distachyon
Bradi4g00517 1.0kb upstream 1.0kb upstream 1000 false Bd4: 235109-236108 Brachypodium distachyon
Bradi4g00517 1.0kb downstream 1.0kb downstream 7054 true Bd4: 228055-235108 Brachypodium distachyon
Bradi4g00517 1.0kb downstream 1.0kb downstream 1000 false Bd4: 228055-229054 Brachypodium distachyon
Bradi4g00517 2.0kb upstream 2.0kb upstream 8054 true Bd4: 229055-237108 Brachypodium distachyon
Bradi4g00517 2.0kb upstream 2.0kb upstream 2000 false Bd4: 235109-237108 Brachypodium distachyon
Bradi4g00517 2.0kb downstream 2.0kb downstream 8054 true Bd4: 227055-235108 Brachypodium distachyon
Bradi4g00517 2.0kb downstream 2.0kb downstream 2000 false Bd4: 227055-229054 Brachypodium distachyon
Bradi4g00517 5.0kb upstream 5.0kb upstream 11054 true Bd4: 229055-240108 Brachypodium distachyon
Bradi4g00517 5.0kb upstream 5.0kb upstream 5000 false Bd4: 235109-240108 Brachypodium distachyon
Bradi4g00517 5.0kb downstream 5.0kb downstream 11054 true Bd4: 224055-235108 Brachypodium distachyon
Bradi4g00517 5.0kb downstream 5.0kb downstream 5000 false Bd4: 224055-229054 Brachypodium distachyon
Bradi4g00517 10.0kb upstream 10.0kb upstream 16054 true Bd4: 229055-245108 Brachypodium distachyon
Bradi4g00517 10.0kb upstream 10.0kb upstream 10000 false Bd4: 235109-245108 Brachypodium distachyon
Bradi4g00517 10.0kb downstream 10.0kb downstream 16054 true Bd4: 219055-235108 Brachypodium distachyon
Bradi4g00517 10.0kb downstream 10.0kb downstream 10000 false Bd4: 219055-229054 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572211 5269 Grass View MSA
122044728 5273 Angiosperm View MSA
121349531 5274 Embryophyte View MSA
123428375 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.85        
cufflinks 9.318        
cufflinks 10.195       High
cufflinks 8.496        
cufflinks 3.61        
cufflinks 7.567        
cufflinks 7.135        
cufflinks 5.881        
cufflinks 7.111        
cufflinks 4.971        
cufflinks 2.31       Low
cufflinks 6.729        
cufflinks 1.655       Low
cufflinks 1.423       Low
cufflinks 2.859        
cufflinks 7.517        
cufflinks 3.555        
cufflinks 9.334        
cufflinks 6.321        
cufflinks 1.656       Low
cufflinks 8.849        
cufflinks 8.107        
cufflinks 6.14        
cufflinks 6.092        
cufflinks 6.283        
cufflinks 8.601        
cufflinks 1.072       Low
cufflinks 7.598        
cufflinks 7.616        
cufflinks 12.386     High High

0 Strain