Gene : Bradi2g42400 B. distachyon v3.1
Defline:  (1 of 2) PTHR33057:SF29 - F18B13.4 PROTEIN Genomic Order:  5076
Name:  ? Bradi2g42400 Secondary Identifier:  ? PAC:32775030
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g42400 0.5kb upstream 0.5kb upstream 1229 true Bd2: 42625901-42627129 Brachypodium distachyon
Bradi2g42400 0.5kb upstream 0.5kb upstream 500 false Bd2: 42625901-42626400 Brachypodium distachyon
Bradi2g42400 0.5kb downstream 0.5kb downstream 1229 true Bd2: 42626401-42627629 Brachypodium distachyon
Bradi2g42400 0.5kb downstream 0.5kb downstream 500 false Bd2: 42627130-42627629 Brachypodium distachyon
Bradi2g42400 1.0kb upstream 1.0kb upstream 1729 true Bd2: 42625401-42627129 Brachypodium distachyon
Bradi2g42400 1.0kb upstream 1.0kb upstream 1000 false Bd2: 42625401-42626400 Brachypodium distachyon
Bradi2g42400 1.0kb downstream 1.0kb downstream 1729 true Bd2: 42626401-42628129 Brachypodium distachyon
Bradi2g42400 1.0kb downstream 1.0kb downstream 1000 false Bd2: 42627130-42628129 Brachypodium distachyon
Bradi2g42400 2.0kb upstream 2.0kb upstream 2729 true Bd2: 42624401-42627129 Brachypodium distachyon
Bradi2g42400 2.0kb upstream 2.0kb upstream 2000 false Bd2: 42624401-42626400 Brachypodium distachyon
Bradi2g42400 2.0kb downstream 2.0kb downstream 2729 true Bd2: 42626401-42629129 Brachypodium distachyon
Bradi2g42400 2.0kb downstream 2.0kb downstream 2000 false Bd2: 42627130-42629129 Brachypodium distachyon
Bradi2g42400 5.0kb upstream 5.0kb upstream 5729 true Bd2: 42621401-42627129 Brachypodium distachyon
Bradi2g42400 5.0kb upstream 5.0kb upstream 5000 false Bd2: 42621401-42626400 Brachypodium distachyon
Bradi2g42400 5.0kb downstream 5.0kb downstream 5729 true Bd2: 42626401-42632129 Brachypodium distachyon
Bradi2g42400 5.0kb downstream 5.0kb downstream 5000 false Bd2: 42627130-42632129 Brachypodium distachyon
Bradi2g42400 10.0kb upstream 10.0kb upstream 10729 true Bd2: 42616401-42627129 Brachypodium distachyon
Bradi2g42400 10.0kb upstream 10.0kb upstream 10000 false Bd2: 42616401-42626400 Brachypodium distachyon
Bradi2g42400 10.0kb downstream 10.0kb downstream 10729 true Bd2: 42626401-42637129 Brachypodium distachyon
Bradi2g42400 10.0kb downstream 10.0kb downstream 10000 false Bd2: 42627130-42637129 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574816 5269 Grass View MSA
122050605 5273 Angiosperm View MSA
121312020 5274 Embryophyte View MSA
123349235 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.037     Low  
cufflinks 0.019     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.045     Low  
cufflinks 0.041     Low  
cufflinks 0.019     Low Low
cufflinks 0.107       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low  
cufflinks 0.071     Low High
cufflinks 0.0     Not Expressed Not Expressed

0 Strain