Gene : Bradi2g42426 B. distachyon v3.1
Defline:  (1 of 56) PF03101//PF10551 - FAR1 DNA-binding domain (FAR1) // MULE transposase domain (MULE) Genomic Order:  5079
Name:  ? Bradi2g42426 Secondary Identifier:  ? PAC:32772662
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g42426 0.5kb upstream 0.5kb upstream 4717 true Bd2: 42674622-42679338 Brachypodium distachyon
Bradi2g42426 0.5kb upstream 0.5kb upstream 500 false Bd2: 42678839-42679338 Brachypodium distachyon
Bradi2g42426 0.5kb downstream 0.5kb downstream 4717 true Bd2: 42674122-42678838 Brachypodium distachyon
Bradi2g42426 0.5kb downstream 0.5kb downstream 500 false Bd2: 42674122-42674621 Brachypodium distachyon
Bradi2g42426 1.0kb upstream 1.0kb upstream 5217 true Bd2: 42674622-42679838 Brachypodium distachyon
Bradi2g42426 1.0kb upstream 1.0kb upstream 1000 false Bd2: 42678839-42679838 Brachypodium distachyon
Bradi2g42426 1.0kb downstream 1.0kb downstream 5217 true Bd2: 42673622-42678838 Brachypodium distachyon
Bradi2g42426 1.0kb downstream 1.0kb downstream 1000 false Bd2: 42673622-42674621 Brachypodium distachyon
Bradi2g42426 2.0kb upstream 2.0kb upstream 6217 true Bd2: 42674622-42680838 Brachypodium distachyon
Bradi2g42426 2.0kb upstream 2.0kb upstream 2000 false Bd2: 42678839-42680838 Brachypodium distachyon
Bradi2g42426 2.0kb downstream 2.0kb downstream 6217 true Bd2: 42672622-42678838 Brachypodium distachyon
Bradi2g42426 2.0kb downstream 2.0kb downstream 2000 false Bd2: 42672622-42674621 Brachypodium distachyon
Bradi2g42426 5.0kb upstream 5.0kb upstream 9217 true Bd2: 42674622-42683838 Brachypodium distachyon
Bradi2g42426 5.0kb upstream 5.0kb upstream 5000 false Bd2: 42678839-42683838 Brachypodium distachyon
Bradi2g42426 5.0kb downstream 5.0kb downstream 9217 true Bd2: 42669622-42678838 Brachypodium distachyon
Bradi2g42426 5.0kb downstream 5.0kb downstream 5000 false Bd2: 42669622-42674621 Brachypodium distachyon
Bradi2g42426 10.0kb upstream 10.0kb upstream 14217 true Bd2: 42674622-42688838 Brachypodium distachyon
Bradi2g42426 10.0kb upstream 10.0kb upstream 10000 false Bd2: 42678839-42688838 Brachypodium distachyon
Bradi2g42426 10.0kb downstream 10.0kb downstream 14217 true Bd2: 42664622-42678838 Brachypodium distachyon
Bradi2g42426 10.0kb downstream 10.0kb downstream 10000 false Bd2: 42664622-42674621 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031606 5273 Angiosperm View MSA
124589040 5269 Grass View MSA
121300621 5274 Embryophyte View MSA
123338368 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain