Gene : Bradi2g42570 B. distachyon v3.1
Defline:  (1 of 1) PTHR10992//PTHR10992:SF841 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN Genomic Order:  5095
Name:  ? Bradi2g42570 Secondary Identifier:  ? PAC:32779914
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g42570 0.5kb upstream 0.5kb upstream 1814 true Bd2: 42799584-42801397 Brachypodium distachyon
Bradi2g42570 0.5kb upstream 0.5kb upstream 500 false Bd2: 42799584-42800083 Brachypodium distachyon
Bradi2g42570 0.5kb downstream 0.5kb downstream 1814 true Bd2: 42800084-42801897 Brachypodium distachyon
Bradi2g42570 0.5kb downstream 0.5kb downstream 500 false Bd2: 42801398-42801897 Brachypodium distachyon
Bradi2g42570 1.0kb upstream 1.0kb upstream 2314 true Bd2: 42799084-42801397 Brachypodium distachyon
Bradi2g42570 1.0kb upstream 1.0kb upstream 1000 false Bd2: 42799084-42800083 Brachypodium distachyon
Bradi2g42570 1.0kb downstream 1.0kb downstream 2314 true Bd2: 42800084-42802397 Brachypodium distachyon
Bradi2g42570 1.0kb downstream 1.0kb downstream 1000 false Bd2: 42801398-42802397 Brachypodium distachyon
Bradi2g42570 2.0kb upstream 2.0kb upstream 3314 true Bd2: 42798084-42801397 Brachypodium distachyon
Bradi2g42570 2.0kb upstream 2.0kb upstream 2000 false Bd2: 42798084-42800083 Brachypodium distachyon
Bradi2g42570 2.0kb downstream 2.0kb downstream 3314 true Bd2: 42800084-42803397 Brachypodium distachyon
Bradi2g42570 2.0kb downstream 2.0kb downstream 2000 false Bd2: 42801398-42803397 Brachypodium distachyon
Bradi2g42570 5.0kb upstream 5.0kb upstream 6314 true Bd2: 42795084-42801397 Brachypodium distachyon
Bradi2g42570 5.0kb upstream 5.0kb upstream 5000 false Bd2: 42795084-42800083 Brachypodium distachyon
Bradi2g42570 5.0kb downstream 5.0kb downstream 6314 true Bd2: 42800084-42806397 Brachypodium distachyon
Bradi2g42570 5.0kb downstream 5.0kb downstream 5000 false Bd2: 42801398-42806397 Brachypodium distachyon
Bradi2g42570 10.0kb upstream 10.0kb upstream 11314 true Bd2: 42790084-42801397 Brachypodium distachyon
Bradi2g42570 10.0kb upstream 10.0kb upstream 10000 false Bd2: 42790084-42800083 Brachypodium distachyon
Bradi2g42570 10.0kb downstream 10.0kb downstream 11314 true Bd2: 42800084-42811397 Brachypodium distachyon
Bradi2g42570 10.0kb downstream 10.0kb downstream 10000 false Bd2: 42801398-42811397 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579052 5269 Grass View MSA
122048522 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121350361 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.793        
cufflinks 2.919        
cufflinks 3.293        
cufflinks 5.747        
cufflinks 4.067        
cufflinks 2.435        
cufflinks 2.366        
cufflinks 4.854        
cufflinks 3.725        
cufflinks 6.301        
cufflinks 9.231     High  
cufflinks 3.142        
cufflinks 5.66        
cufflinks 7.217        
cufflinks 9.474     High  
cufflinks 1.723       Low
cufflinks 5.12        
cufflinks 0.184       Low
cufflinks 10.344       High
cufflinks 13.528     High High
cufflinks 2.371        
cufflinks 3.274        
cufflinks 5.596        
cufflinks 4.362        
cufflinks 3.514        
cufflinks 4.167        
cufflinks 14.667     High High
cufflinks 5.195        
cufflinks 4.352        
cufflinks 2.323        

0 Strain