Gene : Bradi2g42471 B. distachyon v3.1
Defline:  (1 of 1) PTHR12952 - SYS1 Genomic Order:  5084
Name:  ? Bradi2g42471 Secondary Identifier:  ? PAC:32771919
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g42471 0.5kb upstream 0.5kb upstream 5282 true Bd2: 42732289-42737570 Brachypodium distachyon
Bradi2g42471 0.5kb upstream 0.5kb upstream 500 false Bd2: 42732289-42732788 Brachypodium distachyon
Bradi2g42471 0.5kb downstream 0.5kb downstream 5282 true Bd2: 42732789-42738070 Brachypodium distachyon
Bradi2g42471 0.5kb downstream 0.5kb downstream 500 false Bd2: 42737571-42738070 Brachypodium distachyon
Bradi2g42471 1.0kb upstream 1.0kb upstream 5782 true Bd2: 42731789-42737570 Brachypodium distachyon
Bradi2g42471 1.0kb upstream 1.0kb upstream 1000 false Bd2: 42731789-42732788 Brachypodium distachyon
Bradi2g42471 1.0kb downstream 1.0kb downstream 5782 true Bd2: 42732789-42738570 Brachypodium distachyon
Bradi2g42471 1.0kb downstream 1.0kb downstream 1000 false Bd2: 42737571-42738570 Brachypodium distachyon
Bradi2g42471 2.0kb upstream 2.0kb upstream 6782 true Bd2: 42730789-42737570 Brachypodium distachyon
Bradi2g42471 2.0kb upstream 2.0kb upstream 2000 false Bd2: 42730789-42732788 Brachypodium distachyon
Bradi2g42471 2.0kb downstream 2.0kb downstream 6782 true Bd2: 42732789-42739570 Brachypodium distachyon
Bradi2g42471 2.0kb downstream 2.0kb downstream 2000 false Bd2: 42737571-42739570 Brachypodium distachyon
Bradi2g42471 5.0kb upstream 5.0kb upstream 9782 true Bd2: 42727789-42737570 Brachypodium distachyon
Bradi2g42471 5.0kb upstream 5.0kb upstream 5000 false Bd2: 42727789-42732788 Brachypodium distachyon
Bradi2g42471 5.0kb downstream 5.0kb downstream 9782 true Bd2: 42732789-42742570 Brachypodium distachyon
Bradi2g42471 5.0kb downstream 5.0kb downstream 5000 false Bd2: 42737571-42742570 Brachypodium distachyon
Bradi2g42471 10.0kb upstream 10.0kb upstream 14782 true Bd2: 42722789-42737570 Brachypodium distachyon
Bradi2g42471 10.0kb upstream 10.0kb upstream 10000 false Bd2: 42722789-42732788 Brachypodium distachyon
Bradi2g42471 10.0kb downstream 10.0kb downstream 14782 true Bd2: 42732789-42747570 Brachypodium distachyon
Bradi2g42471 10.0kb downstream 10.0kb downstream 10000 false Bd2: 42737571-42747570 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121972487 5273 Angiosperm View MSA
124546306 5269 Grass View MSA
121242960 5274 Embryophyte View MSA
123428394 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.804        
cufflinks 2.421        
cufflinks 2.429        
cufflinks 2.187        
cufflinks 1.933        
cufflinks 2.378        
cufflinks 2.614        
cufflinks 2.499        
cufflinks 2.278        
cufflinks 2.456        
cufflinks 1.407       Low
cufflinks 2.257        
cufflinks 1.249       Low
cufflinks 1.547        
cufflinks 2.033        
cufflinks 2.546        
cufflinks 3.439        
cufflinks 4.985       High
cufflinks 3.76       High
cufflinks 1.091       Low
cufflinks 5.243       High
cufflinks 2.59        
cufflinks 2.376        
cufflinks 2.284        
cufflinks 2.327        
cufflinks 2.416        
cufflinks 1.73        
cufflinks 2.525        
cufflinks 2.356        
cufflinks 4.191       High

0 Strain