Gene : Bradi4g01920 B. distachyon v3.1
Defline:  (1 of 1) K01940 - argininosuccinate synthase (argG, ASS1) Genomic Order:  213
Name:  ? Bradi4g01920 Secondary Identifier:  ? PAC:32789264
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon ARGSYNBSUB-PWY Brachypodium distachyon pathologic  
Bdistachyon ARGSYN-PWY Brachypodium distachyon pathologic  
Bdistachyon PWY-4984 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g01920 0.5kb upstream 0.5kb upstream 4895 true Bd4: 1259273-1264167 Brachypodium distachyon
Bradi4g01920 0.5kb upstream 0.5kb upstream 500 false Bd4: 1263668-1264167 Brachypodium distachyon
Bradi4g01920 0.5kb downstream 0.5kb downstream 4895 true Bd4: 1258773-1263667 Brachypodium distachyon
Bradi4g01920 0.5kb downstream 0.5kb downstream 500 false Bd4: 1258773-1259272 Brachypodium distachyon
Bradi4g01920 1.0kb upstream 1.0kb upstream 5395 true Bd4: 1259273-1264667 Brachypodium distachyon
Bradi4g01920 1.0kb upstream 1.0kb upstream 1000 false Bd4: 1263668-1264667 Brachypodium distachyon
Bradi4g01920 1.0kb downstream 1.0kb downstream 5395 true Bd4: 1258273-1263667 Brachypodium distachyon
Bradi4g01920 1.0kb downstream 1.0kb downstream 1000 false Bd4: 1258273-1259272 Brachypodium distachyon
Bradi4g01920 2.0kb upstream 2.0kb upstream 6395 true Bd4: 1259273-1265667 Brachypodium distachyon
Bradi4g01920 2.0kb upstream 2.0kb upstream 2000 false Bd4: 1263668-1265667 Brachypodium distachyon
Bradi4g01920 2.0kb downstream 2.0kb downstream 6395 true Bd4: 1257273-1263667 Brachypodium distachyon
Bradi4g01920 2.0kb downstream 2.0kb downstream 2000 false Bd4: 1257273-1259272 Brachypodium distachyon
Bradi4g01920 5.0kb upstream 5.0kb upstream 9395 true Bd4: 1259273-1268667 Brachypodium distachyon
Bradi4g01920 5.0kb upstream 5.0kb upstream 5000 false Bd4: 1263668-1268667 Brachypodium distachyon
Bradi4g01920 5.0kb downstream 5.0kb downstream 9395 true Bd4: 1254273-1263667 Brachypodium distachyon
Bradi4g01920 5.0kb downstream 5.0kb downstream 5000 false Bd4: 1254273-1259272 Brachypodium distachyon
Bradi4g01920 10.0kb upstream 10.0kb upstream 14395 true Bd4: 1259273-1273667 Brachypodium distachyon
Bradi4g01920 10.0kb upstream 10.0kb upstream 10000 false Bd4: 1263668-1273667 Brachypodium distachyon
Bradi4g01920 10.0kb downstream 10.0kb downstream 14395 true Bd4: 1249273-1263667 Brachypodium distachyon
Bradi4g01920 10.0kb downstream 10.0kb downstream 10000 false Bd4: 1249273-1259272 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041429 5273 Angiosperm View MSA
124577009 5269 Grass View MSA
121345676 5274 Embryophyte View MSA
123423772 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.162     High  
cufflinks 29.179     High  
cufflinks 27.958     High  
cufflinks 29.58     High  
cufflinks 25.975     High  
cufflinks 24.139     High  
cufflinks 24.634     High  
cufflinks 19.227     High  
cufflinks 20.127     High  
cufflinks 18.18     High  
cufflinks 5.269       Low
cufflinks 21.468     High  
cufflinks 3.889       Low
cufflinks 3.393       Low
cufflinks 11.542     High  
cufflinks 27.481     High  
cufflinks 38.456     High High
cufflinks 37.543     High High
cufflinks 30.318     High  
cufflinks 15.671     High  
cufflinks 28.514     High  
cufflinks 20.698     High  
cufflinks 15.751     High  
cufflinks 16.721     High  
cufflinks 22.596     High  
cufflinks 25.437     High  
cufflinks 4.504       Low
cufflinks 21.738     High  
cufflinks 21.933     High  
cufflinks 31.429     High  

0 Strain