Gene : Bradi2g42950 B. distachyon v3.1
Defline:  (1 of 2) PTHR20922:SF17 - F24J5.3 Genomic Order:  5148
Name:  ? Bradi2g42950 Secondary Identifier:  ? PAC:32780004
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g42950 0.5kb upstream 0.5kb upstream 6252 true Bd2: 43181537-43187788 Brachypodium distachyon
Bradi2g42950 0.5kb upstream 0.5kb upstream 500 false Bd2: 43187289-43187788 Brachypodium distachyon
Bradi2g42950 0.5kb downstream 0.5kb downstream 6252 true Bd2: 43181037-43187288 Brachypodium distachyon
Bradi2g42950 0.5kb downstream 0.5kb downstream 500 false Bd2: 43181037-43181536 Brachypodium distachyon
Bradi2g42950 1.0kb upstream 1.0kb upstream 6752 true Bd2: 43181537-43188288 Brachypodium distachyon
Bradi2g42950 1.0kb upstream 1.0kb upstream 1000 false Bd2: 43187289-43188288 Brachypodium distachyon
Bradi2g42950 1.0kb downstream 1.0kb downstream 6752 true Bd2: 43180537-43187288 Brachypodium distachyon
Bradi2g42950 1.0kb downstream 1.0kb downstream 1000 false Bd2: 43180537-43181536 Brachypodium distachyon
Bradi2g42950 2.0kb upstream 2.0kb upstream 7752 true Bd2: 43181537-43189288 Brachypodium distachyon
Bradi2g42950 2.0kb upstream 2.0kb upstream 2000 false Bd2: 43187289-43189288 Brachypodium distachyon
Bradi2g42950 2.0kb downstream 2.0kb downstream 7752 true Bd2: 43179537-43187288 Brachypodium distachyon
Bradi2g42950 2.0kb downstream 2.0kb downstream 2000 false Bd2: 43179537-43181536 Brachypodium distachyon
Bradi2g42950 5.0kb upstream 5.0kb upstream 10752 true Bd2: 43181537-43192288 Brachypodium distachyon
Bradi2g42950 5.0kb upstream 5.0kb upstream 5000 false Bd2: 43187289-43192288 Brachypodium distachyon
Bradi2g42950 5.0kb downstream 5.0kb downstream 10752 true Bd2: 43176537-43187288 Brachypodium distachyon
Bradi2g42950 5.0kb downstream 5.0kb downstream 5000 false Bd2: 43176537-43181536 Brachypodium distachyon
Bradi2g42950 10.0kb upstream 10.0kb upstream 15752 true Bd2: 43181537-43197288 Brachypodium distachyon
Bradi2g42950 10.0kb upstream 10.0kb upstream 10000 false Bd2: 43187289-43197288 Brachypodium distachyon
Bradi2g42950 10.0kb downstream 10.0kb downstream 15752 true Bd2: 43171537-43187288 Brachypodium distachyon
Bradi2g42950 10.0kb downstream 10.0kb downstream 10000 false Bd2: 43171537-43181536 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124581215 5269 Grass View MSA
122048491 5273 Angiosperm View MSA
121349693 5274 Embryophyte View MSA
123425918 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.57        
cufflinks 4.658        
cufflinks 4.289        
cufflinks 5.747       High
cufflinks 3.074        
cufflinks 3.734        
cufflinks 3.822        
cufflinks 3.598        
cufflinks 3.358        
cufflinks 4.002        
cufflinks 2.237       Low
cufflinks 3.034        
cufflinks 2.055       Low
cufflinks 2.3       Low
cufflinks 3.072        
cufflinks 3.42        
cufflinks 4.551        
cufflinks 1.911       Low
cufflinks 5.72       High
cufflinks 3.242        
cufflinks 4.169        
cufflinks 3.255        
cufflinks 3.471        
cufflinks 3.349        
cufflinks 4.136        
cufflinks 5.171       High
cufflinks 2.746        
cufflinks 5.139       High
cufflinks 3.962        
cufflinks 4.202        

0 Strain