Gene : Bradi2g48150 B. distachyon v3.1
Defline:  (1 of 1) 3.2.1.1//3.2.1.141 - Alpha-amylase / Glycogenase // 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase / Maltooligosyl trehalose trehalohydrolase Genomic Order:  5782
Name:  ? Bradi2g48150 Secondary Identifier:  ? PAC:32778976
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g48150 0.5kb upstream 0.5kb upstream 11350 true Bd2: 48235634-48246983 Brachypodium distachyon
Bradi2g48150 0.5kb upstream 0.5kb upstream 500 false Bd2: 48235634-48236133 Brachypodium distachyon
Bradi2g48150 0.5kb downstream 0.5kb downstream 11350 true Bd2: 48236134-48247483 Brachypodium distachyon
Bradi2g48150 0.5kb downstream 0.5kb downstream 500 false Bd2: 48246984-48247483 Brachypodium distachyon
Bradi2g48150 1.0kb upstream 1.0kb upstream 11850 true Bd2: 48235134-48246983 Brachypodium distachyon
Bradi2g48150 1.0kb upstream 1.0kb upstream 1000 false Bd2: 48235134-48236133 Brachypodium distachyon
Bradi2g48150 1.0kb downstream 1.0kb downstream 11850 true Bd2: 48236134-48247983 Brachypodium distachyon
Bradi2g48150 1.0kb downstream 1.0kb downstream 1000 false Bd2: 48246984-48247983 Brachypodium distachyon
Bradi2g48150 2.0kb upstream 2.0kb upstream 12850 true Bd2: 48234134-48246983 Brachypodium distachyon
Bradi2g48150 2.0kb upstream 2.0kb upstream 2000 false Bd2: 48234134-48236133 Brachypodium distachyon
Bradi2g48150 2.0kb downstream 2.0kb downstream 12850 true Bd2: 48236134-48248983 Brachypodium distachyon
Bradi2g48150 2.0kb downstream 2.0kb downstream 2000 false Bd2: 48246984-48248983 Brachypodium distachyon
Bradi2g48150 5.0kb upstream 5.0kb upstream 15850 true Bd2: 48231134-48246983 Brachypodium distachyon
Bradi2g48150 5.0kb upstream 5.0kb upstream 5000 false Bd2: 48231134-48236133 Brachypodium distachyon
Bradi2g48150 5.0kb downstream 5.0kb downstream 15850 true Bd2: 48236134-48251983 Brachypodium distachyon
Bradi2g48150 5.0kb downstream 5.0kb downstream 5000 false Bd2: 48246984-48251983 Brachypodium distachyon
Bradi2g48150 10.0kb upstream 10.0kb upstream 20850 true Bd2: 48226134-48246983 Brachypodium distachyon
Bradi2g48150 10.0kb upstream 10.0kb upstream 10000 false Bd2: 48226134-48236133 Brachypodium distachyon
Bradi2g48150 10.0kb downstream 10.0kb downstream 20850 true Bd2: 48236134-48256983 Brachypodium distachyon
Bradi2g48150 10.0kb downstream 10.0kb downstream 10000 false Bd2: 48246984-48256983 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041096 5273 Angiosperm View MSA
124582199 5269 Grass View MSA
121348688 5274 Embryophyte View MSA
123427521 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.848     High  
cufflinks 12.459     High  
cufflinks 17.357     High  
cufflinks 16.419     High  
cufflinks 10.714     High  
cufflinks 10.913     High  
cufflinks 8.498        
cufflinks 12.749     High  
cufflinks 12.592     High  
cufflinks 9.99        
cufflinks 19.358     High  
cufflinks 16.696     High  
cufflinks 19.671     High  
cufflinks 18.867     High  
cufflinks 16.361     High  
cufflinks 12.304     High  
cufflinks 8.229        
cufflinks 1.547       Low
cufflinks 3.721       Low
cufflinks 10.469        
cufflinks 3.316       Low
cufflinks 17.59     High  
cufflinks 14.442     High  
cufflinks 13.613     High  
cufflinks 10.332     High  
cufflinks 14.3     High  
cufflinks 9.57     High  
cufflinks 11.394     High  
cufflinks 13.621     High  
cufflinks 4.904       Low

0 Strain