Gene : Bradi2g48170 B. distachyon v3.1
Defline:  (1 of 1) PTHR31752//PTHR31752:SF10 - FAMILY NOT NAMED // AUXIN EFFLUX CARRIER COMPONENT 5-RELATED Genomic Order:  5785
Name:  ? Bradi2g48170 Secondary Identifier:  ? PAC:32776314
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g48170 0.5kb upstream 0.5kb upstream 3323 true Bd2: 48252914-48256236 Brachypodium distachyon
Bradi2g48170 0.5kb upstream 0.5kb upstream 500 false Bd2: 48255737-48256236 Brachypodium distachyon
Bradi2g48170 0.5kb downstream 0.5kb downstream 3323 true Bd2: 48252414-48255736 Brachypodium distachyon
Bradi2g48170 0.5kb downstream 0.5kb downstream 500 false Bd2: 48252414-48252913 Brachypodium distachyon
Bradi2g48170 1.0kb upstream 1.0kb upstream 3823 true Bd2: 48252914-48256736 Brachypodium distachyon
Bradi2g48170 1.0kb upstream 1.0kb upstream 1000 false Bd2: 48255737-48256736 Brachypodium distachyon
Bradi2g48170 1.0kb downstream 1.0kb downstream 3823 true Bd2: 48251914-48255736 Brachypodium distachyon
Bradi2g48170 1.0kb downstream 1.0kb downstream 1000 false Bd2: 48251914-48252913 Brachypodium distachyon
Bradi2g48170 2.0kb upstream 2.0kb upstream 4823 true Bd2: 48252914-48257736 Brachypodium distachyon
Bradi2g48170 2.0kb upstream 2.0kb upstream 2000 false Bd2: 48255737-48257736 Brachypodium distachyon
Bradi2g48170 2.0kb downstream 2.0kb downstream 4823 true Bd2: 48250914-48255736 Brachypodium distachyon
Bradi2g48170 2.0kb downstream 2.0kb downstream 2000 false Bd2: 48250914-48252913 Brachypodium distachyon
Bradi2g48170 5.0kb upstream 5.0kb upstream 7823 true Bd2: 48252914-48260736 Brachypodium distachyon
Bradi2g48170 5.0kb upstream 5.0kb upstream 5000 false Bd2: 48255737-48260736 Brachypodium distachyon
Bradi2g48170 5.0kb downstream 5.0kb downstream 7823 true Bd2: 48247914-48255736 Brachypodium distachyon
Bradi2g48170 5.0kb downstream 5.0kb downstream 5000 false Bd2: 48247914-48252913 Brachypodium distachyon
Bradi2g48170 10.0kb upstream 10.0kb upstream 12823 true Bd2: 48252914-48265736 Brachypodium distachyon
Bradi2g48170 10.0kb upstream 10.0kb upstream 10000 false Bd2: 48255737-48265736 Brachypodium distachyon
Bradi2g48170 10.0kb downstream 10.0kb downstream 12823 true Bd2: 48242914-48255736 Brachypodium distachyon
Bradi2g48170 10.0kb downstream 10.0kb downstream 10000 false Bd2: 48242914-48252913 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124581595 5269 Grass View MSA
122050632 5273 Angiosperm View MSA
121312040 5274 Embryophyte View MSA
123349252 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.709        
cufflinks 1.171        
cufflinks 1.289        
cufflinks 1.55        
cufflinks 0.344        
cufflinks 0.627        
cufflinks 0.711        
cufflinks 0.627        
cufflinks 0.469        
cufflinks 0.553        
cufflinks 0.012     Low Low
cufflinks 0.934        
cufflinks 0.051     Low Low
cufflinks 0.023     Low Low
cufflinks 0.515        
cufflinks 0.755        
cufflinks 0.867        
cufflinks 0.434        
cufflinks 1.575        
cufflinks 0.093     Low Low
cufflinks 2.805       High
cufflinks 0.772        
cufflinks 0.795        
cufflinks 0.602        
cufflinks 0.788        
cufflinks 1.572        
cufflinks 0.049     Low Low
cufflinks 1.316        
cufflinks 1.034        
cufflinks 1.649        

0 Strain