Gene : Bradi2g48350 B. distachyon v3.1
Defline:  (1 of 1) PTHR11814:SF54 - SULFATE TRANSPORTER 3.5-RELATED Genomic Order:  5804
Name:  ? Bradi2g48350 Secondary Identifier:  ? PAC:32775898
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g48350 0.5kb upstream 0.5kb upstream 5166 true Bd2: 48432769-48437934 Brachypodium distachyon
Bradi2g48350 0.5kb upstream 0.5kb upstream 500 false Bd2: 48432769-48433268 Brachypodium distachyon
Bradi2g48350 0.5kb downstream 0.5kb downstream 5166 true Bd2: 48433269-48438434 Brachypodium distachyon
Bradi2g48350 0.5kb downstream 0.5kb downstream 500 false Bd2: 48437935-48438434 Brachypodium distachyon
Bradi2g48350 1.0kb upstream 1.0kb upstream 5666 true Bd2: 48432269-48437934 Brachypodium distachyon
Bradi2g48350 1.0kb upstream 1.0kb upstream 1000 false Bd2: 48432269-48433268 Brachypodium distachyon
Bradi2g48350 1.0kb downstream 1.0kb downstream 5666 true Bd2: 48433269-48438934 Brachypodium distachyon
Bradi2g48350 1.0kb downstream 1.0kb downstream 1000 false Bd2: 48437935-48438934 Brachypodium distachyon
Bradi2g48350 2.0kb upstream 2.0kb upstream 6666 true Bd2: 48431269-48437934 Brachypodium distachyon
Bradi2g48350 2.0kb upstream 2.0kb upstream 2000 false Bd2: 48431269-48433268 Brachypodium distachyon
Bradi2g48350 2.0kb downstream 2.0kb downstream 6666 true Bd2: 48433269-48439934 Brachypodium distachyon
Bradi2g48350 2.0kb downstream 2.0kb downstream 2000 false Bd2: 48437935-48439934 Brachypodium distachyon
Bradi2g48350 5.0kb upstream 5.0kb upstream 9666 true Bd2: 48428269-48437934 Brachypodium distachyon
Bradi2g48350 5.0kb upstream 5.0kb upstream 5000 false Bd2: 48428269-48433268 Brachypodium distachyon
Bradi2g48350 5.0kb downstream 5.0kb downstream 9666 true Bd2: 48433269-48442934 Brachypodium distachyon
Bradi2g48350 5.0kb downstream 5.0kb downstream 5000 false Bd2: 48437935-48442934 Brachypodium distachyon
Bradi2g48350 10.0kb upstream 10.0kb upstream 14666 true Bd2: 48423269-48437934 Brachypodium distachyon
Bradi2g48350 10.0kb upstream 10.0kb upstream 10000 false Bd2: 48423269-48433268 Brachypodium distachyon
Bradi2g48350 10.0kb downstream 10.0kb downstream 14666 true Bd2: 48433269-48447934 Brachypodium distachyon
Bradi2g48350 10.0kb downstream 10.0kb downstream 10000 false Bd2: 48437935-48447934 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026214 5273 Angiosperm View MSA
124575236 5269 Grass View MSA
121296227 5274 Embryophyte View MSA
123334427 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.306        
cufflinks 0.389        
cufflinks 0.275        
cufflinks 0.351        
cufflinks 0.554        
cufflinks 1.042        
cufflinks 0.702        
cufflinks 1.606        
cufflinks 1.058        
cufflinks 0.743        
cufflinks 1.167        
cufflinks 0.523        
cufflinks 2.813       High
cufflinks 0.159       Low
cufflinks 0.757        
cufflinks 0.562        
cufflinks 0.259        
cufflinks 14.203     High High
cufflinks 1.337        
cufflinks 5.712       High
cufflinks 2.017        
cufflinks 1.265        
cufflinks 1.028        
cufflinks 0.626        
cufflinks 0.72        
cufflinks 0.321        
cufflinks 0.085     Low Low
cufflinks 0.528        
cufflinks 0.596        
cufflinks 0.608        

0 Strain