Gene : Bradi2g48510 B. distachyon v3.1
Defline:  (1 of 1) 2.3.1.129 - Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase / UDP-N-acetylglucosamine acyltransferase Genomic Order:  5830
Name:  ? Bradi2g48510 Secondary Identifier:  ? PAC:32775564
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon NAGLIPASYN-PWY Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g48510 0.5kb upstream 0.5kb upstream 5608 true Bd2: 48562527-48568134 Brachypodium distachyon
Bradi2g48510 0.5kb upstream 0.5kb upstream 500 false Bd2: 48562527-48563026 Brachypodium distachyon
Bradi2g48510 0.5kb downstream 0.5kb downstream 5608 true Bd2: 48563027-48568634 Brachypodium distachyon
Bradi2g48510 0.5kb downstream 0.5kb downstream 500 false Bd2: 48568135-48568634 Brachypodium distachyon
Bradi2g48510 1.0kb upstream 1.0kb upstream 6108 true Bd2: 48562027-48568134 Brachypodium distachyon
Bradi2g48510 1.0kb upstream 1.0kb upstream 1000 false Bd2: 48562027-48563026 Brachypodium distachyon
Bradi2g48510 1.0kb downstream 1.0kb downstream 6108 true Bd2: 48563027-48569134 Brachypodium distachyon
Bradi2g48510 1.0kb downstream 1.0kb downstream 1000 false Bd2: 48568135-48569134 Brachypodium distachyon
Bradi2g48510 2.0kb upstream 2.0kb upstream 7108 true Bd2: 48561027-48568134 Brachypodium distachyon
Bradi2g48510 2.0kb upstream 2.0kb upstream 2000 false Bd2: 48561027-48563026 Brachypodium distachyon
Bradi2g48510 2.0kb downstream 2.0kb downstream 7108 true Bd2: 48563027-48570134 Brachypodium distachyon
Bradi2g48510 2.0kb downstream 2.0kb downstream 2000 false Bd2: 48568135-48570134 Brachypodium distachyon
Bradi2g48510 5.0kb upstream 5.0kb upstream 10108 true Bd2: 48558027-48568134 Brachypodium distachyon
Bradi2g48510 5.0kb upstream 5.0kb upstream 5000 false Bd2: 48558027-48563026 Brachypodium distachyon
Bradi2g48510 5.0kb downstream 5.0kb downstream 10108 true Bd2: 48563027-48573134 Brachypodium distachyon
Bradi2g48510 5.0kb downstream 5.0kb downstream 5000 false Bd2: 48568135-48573134 Brachypodium distachyon
Bradi2g48510 10.0kb upstream 10.0kb upstream 15108 true Bd2: 48553027-48568134 Brachypodium distachyon
Bradi2g48510 10.0kb upstream 10.0kb upstream 10000 false Bd2: 48553027-48563026 Brachypodium distachyon
Bradi2g48510 10.0kb downstream 10.0kb downstream 15108 true Bd2: 48563027-48578134 Brachypodium distachyon
Bradi2g48510 10.0kb downstream 10.0kb downstream 10000 false Bd2: 48568135-48578134 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041125 5273 Angiosperm View MSA
124582641 5269 Grass View MSA
121347426 5274 Embryophyte View MSA
123380545 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.897        
cufflinks 1.462        
cufflinks 1.821        
cufflinks 1.479        
cufflinks 0.618       Low
cufflinks 1.346        
cufflinks 1.368        
cufflinks 1.371        
cufflinks 1.48        
cufflinks 1.478        
cufflinks 1.649        
cufflinks 1.292        
cufflinks 1.39        
cufflinks 1.413        
cufflinks 1.086        
cufflinks 1.296        
cufflinks 1.07        
cufflinks 1.489        
cufflinks 1.384        
cufflinks 0.295       Low
cufflinks 1.075        
cufflinks 1.862       High
cufflinks 1.335        
cufflinks 1.225        
cufflinks 1.275        
cufflinks 1.882       High
cufflinks 1.957       High
cufflinks 1.908       High
cufflinks 1.769        
cufflinks 1.016        

0 Strain