Gene : Bradi2g48620 B. distachyon v3.1
Defline:  (1 of 1) PTHR19241//PTHR19241:SF224 - ATP-BINDING CASSETTE TRANSPORTER // ABC TRANSPORTER G FAMILY MEMBER 35-RELATED Genomic Order:  5841
Name:  ? Bradi2g48620 Secondary Identifier:  ? PAC:32777712
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g48620 0.5kb upstream 0.5kb upstream 9214 true Bd2: 48663354-48672567 Brachypodium distachyon
Bradi2g48620 0.5kb upstream 0.5kb upstream 500 false Bd2: 48663354-48663853 Brachypodium distachyon
Bradi2g48620 0.5kb downstream 0.5kb downstream 9214 true Bd2: 48663854-48673067 Brachypodium distachyon
Bradi2g48620 0.5kb downstream 0.5kb downstream 500 false Bd2: 48672568-48673067 Brachypodium distachyon
Bradi2g48620 1.0kb upstream 1.0kb upstream 9714 true Bd2: 48662854-48672567 Brachypodium distachyon
Bradi2g48620 1.0kb upstream 1.0kb upstream 1000 false Bd2: 48662854-48663853 Brachypodium distachyon
Bradi2g48620 1.0kb downstream 1.0kb downstream 9714 true Bd2: 48663854-48673567 Brachypodium distachyon
Bradi2g48620 1.0kb downstream 1.0kb downstream 1000 false Bd2: 48672568-48673567 Brachypodium distachyon
Bradi2g48620 2.0kb upstream 2.0kb upstream 10714 true Bd2: 48661854-48672567 Brachypodium distachyon
Bradi2g48620 2.0kb upstream 2.0kb upstream 2000 false Bd2: 48661854-48663853 Brachypodium distachyon
Bradi2g48620 2.0kb downstream 2.0kb downstream 10714 true Bd2: 48663854-48674567 Brachypodium distachyon
Bradi2g48620 2.0kb downstream 2.0kb downstream 2000 false Bd2: 48672568-48674567 Brachypodium distachyon
Bradi2g48620 5.0kb upstream 5.0kb upstream 13714 true Bd2: 48658854-48672567 Brachypodium distachyon
Bradi2g48620 5.0kb upstream 5.0kb upstream 5000 false Bd2: 48658854-48663853 Brachypodium distachyon
Bradi2g48620 5.0kb downstream 5.0kb downstream 13714 true Bd2: 48663854-48677567 Brachypodium distachyon
Bradi2g48620 5.0kb downstream 5.0kb downstream 5000 false Bd2: 48672568-48677567 Brachypodium distachyon
Bradi2g48620 10.0kb upstream 10.0kb upstream 18714 true Bd2: 48653854-48672567 Brachypodium distachyon
Bradi2g48620 10.0kb upstream 10.0kb upstream 10000 false Bd2: 48653854-48663853 Brachypodium distachyon
Bradi2g48620 10.0kb downstream 10.0kb downstream 18714 true Bd2: 48663854-48682567 Brachypodium distachyon
Bradi2g48620 10.0kb downstream 10.0kb downstream 10000 false Bd2: 48672568-48682567 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569720 5269 Grass View MSA
122047609 5273 Angiosperm View MSA
123428903 5275 Viridiplantae View MSA
121351020 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.039     Low  
cufflinks 0.153       High
cufflinks 0.118       High
cufflinks 0.119       High
cufflinks 0.021     Low Low
cufflinks 0.089     Low  
cufflinks 0.072     Low  
cufflinks 0.036     Low  
cufflinks 0.071     Low  
cufflinks 0.028     Low  
cufflinks 0.039     Low  
cufflinks 0.061     Low  
cufflinks 0.041     Low  
cufflinks 0.032     Low  
cufflinks 0.017     Low Low
cufflinks 0.073     Low  
cufflinks 0.062     Low  
cufflinks 0.106     Low High
cufflinks 0.021     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.094     Low  
cufflinks 0.044     Low  
cufflinks 0.042     Low  
cufflinks 0.058     Low  
cufflinks 0.064     Low  
cufflinks 0.083     Low  
cufflinks 0.019     Low Low
cufflinks 0.058     Low  
cufflinks 0.058     Low  
cufflinks 0.134       High

0 Strain