Gene : Bradi4g06047 B. distachyon v3.1
Defline:  (1 of 5) PTHR21250:SF0 - PRE-RRNA-PROCESSING PROTEIN TSR2 HOMOLOG Genomic Order:  784
Name:  ? Bradi4g06047 Secondary Identifier:  ? PAC:32783694
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g06047 0.5kb upstream 0.5kb upstream 1639 true Bd4: 5007328-5008966 Brachypodium distachyon
Bradi4g06047 0.5kb upstream 0.5kb upstream 500 false Bd4: 5007328-5007827 Brachypodium distachyon
Bradi4g06047 0.5kb downstream 0.5kb downstream 1639 true Bd4: 5007828-5009466 Brachypodium distachyon
Bradi4g06047 0.5kb downstream 0.5kb downstream 500 false Bd4: 5008967-5009466 Brachypodium distachyon
Bradi4g06047 1.0kb upstream 1.0kb upstream 2139 true Bd4: 5006828-5008966 Brachypodium distachyon
Bradi4g06047 1.0kb upstream 1.0kb upstream 1000 false Bd4: 5006828-5007827 Brachypodium distachyon
Bradi4g06047 1.0kb downstream 1.0kb downstream 2139 true Bd4: 5007828-5009966 Brachypodium distachyon
Bradi4g06047 1.0kb downstream 1.0kb downstream 1000 false Bd4: 5008967-5009966 Brachypodium distachyon
Bradi4g06047 2.0kb upstream 2.0kb upstream 3139 true Bd4: 5005828-5008966 Brachypodium distachyon
Bradi4g06047 2.0kb upstream 2.0kb upstream 2000 false Bd4: 5005828-5007827 Brachypodium distachyon
Bradi4g06047 2.0kb downstream 2.0kb downstream 3139 true Bd4: 5007828-5010966 Brachypodium distachyon
Bradi4g06047 2.0kb downstream 2.0kb downstream 2000 false Bd4: 5008967-5010966 Brachypodium distachyon
Bradi4g06047 5.0kb upstream 5.0kb upstream 6139 true Bd4: 5002828-5008966 Brachypodium distachyon
Bradi4g06047 5.0kb upstream 5.0kb upstream 5000 false Bd4: 5002828-5007827 Brachypodium distachyon
Bradi4g06047 5.0kb downstream 5.0kb downstream 6139 true Bd4: 5007828-5013966 Brachypodium distachyon
Bradi4g06047 5.0kb downstream 5.0kb downstream 5000 false Bd4: 5008967-5013966 Brachypodium distachyon
Bradi4g06047 10.0kb upstream 10.0kb upstream 11139 true Bd4: 4997828-5008966 Brachypodium distachyon
Bradi4g06047 10.0kb upstream 10.0kb upstream 10000 false Bd4: 4997828-5007827 Brachypodium distachyon
Bradi4g06047 10.0kb downstream 10.0kb downstream 11139 true Bd4: 5007828-5018966 Brachypodium distachyon
Bradi4g06047 10.0kb downstream 10.0kb downstream 10000 false Bd4: 5008967-5018966 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029524 5273 Angiosperm View MSA
124585578 5269 Grass View MSA
121298842 5274 Embryophyte View MSA
123336784 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain