Gene : Bradi4g06030 B. distachyon v3.1
Defline:  (1 of 1) PTHR37236:SF1 - AUXIN-BINDING PROTEIN 1 Genomic Order:  782
Name:  ? Bradi4g06030 Secondary Identifier:  ? PAC:32789007
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g06030 0.5kb upstream 0.5kb upstream 3332 true Bd4: 4998040-5001371 Brachypodium distachyon
Bradi4g06030 0.5kb upstream 0.5kb upstream 500 false Bd4: 4998040-4998539 Brachypodium distachyon
Bradi4g06030 0.5kb downstream 0.5kb downstream 3332 true Bd4: 4998540-5001871 Brachypodium distachyon
Bradi4g06030 0.5kb downstream 0.5kb downstream 500 false Bd4: 5001372-5001871 Brachypodium distachyon
Bradi4g06030 1.0kb upstream 1.0kb upstream 3832 true Bd4: 4997540-5001371 Brachypodium distachyon
Bradi4g06030 1.0kb upstream 1.0kb upstream 1000 false Bd4: 4997540-4998539 Brachypodium distachyon
Bradi4g06030 1.0kb downstream 1.0kb downstream 3832 true Bd4: 4998540-5002371 Brachypodium distachyon
Bradi4g06030 1.0kb downstream 1.0kb downstream 1000 false Bd4: 5001372-5002371 Brachypodium distachyon
Bradi4g06030 2.0kb upstream 2.0kb upstream 4832 true Bd4: 4996540-5001371 Brachypodium distachyon
Bradi4g06030 2.0kb upstream 2.0kb upstream 2000 false Bd4: 4996540-4998539 Brachypodium distachyon
Bradi4g06030 2.0kb downstream 2.0kb downstream 4832 true Bd4: 4998540-5003371 Brachypodium distachyon
Bradi4g06030 2.0kb downstream 2.0kb downstream 2000 false Bd4: 5001372-5003371 Brachypodium distachyon
Bradi4g06030 5.0kb upstream 5.0kb upstream 7832 true Bd4: 4993540-5001371 Brachypodium distachyon
Bradi4g06030 5.0kb upstream 5.0kb upstream 5000 false Bd4: 4993540-4998539 Brachypodium distachyon
Bradi4g06030 5.0kb downstream 5.0kb downstream 7832 true Bd4: 4998540-5006371 Brachypodium distachyon
Bradi4g06030 5.0kb downstream 5.0kb downstream 5000 false Bd4: 5001372-5006371 Brachypodium distachyon
Bradi4g06030 10.0kb upstream 10.0kb upstream 12832 true Bd4: 4988540-5001371 Brachypodium distachyon
Bradi4g06030 10.0kb upstream 10.0kb upstream 10000 false Bd4: 4988540-4998539 Brachypodium distachyon
Bradi4g06030 10.0kb downstream 10.0kb downstream 12832 true Bd4: 4998540-5011371 Brachypodium distachyon
Bradi4g06030 10.0kb downstream 10.0kb downstream 10000 false Bd4: 5001372-5011371 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586469 5269 Grass View MSA
122049427 5273 Angiosperm View MSA
121346924 5274 Embryophyte View MSA
123426893 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.918       Low
cufflinks 2.82        
cufflinks 2.907        
cufflinks 3.243        
cufflinks 3.938        
cufflinks 2.989        
cufflinks 3.282        
cufflinks 3.503        
cufflinks 3.28        
cufflinks 4.026        
cufflinks 3.104        
cufflinks 2.714        
cufflinks 3.407        
cufflinks 3.343        
cufflinks 3.01        
cufflinks 2.464        
cufflinks 3.832        
cufflinks 1.404       Low
cufflinks 4.401        
cufflinks 2.219        
cufflinks 4.598        
cufflinks 2.904        
cufflinks 3.825        
cufflinks 3.418        
cufflinks 3.326        
cufflinks 3.657        
cufflinks 2.892        
cufflinks 3.691        
cufflinks 3.2        
cufflinks 2.435        

0 Strain