Gene : Bradi2g48890 B. distachyon v3.1
Defline:  (1 of 1) PTHR24078//PTHR24078:SF207 - DNAJ HOMOLOG SUBFAMILY C MEMBER // PROTEIN DNJ-19 Genomic Order:  5872
Name:  ? Bradi2g48890 Secondary Identifier:  ? PAC:32780861
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g48890 0.5kb upstream 0.5kb upstream 3152 true Bd2: 48843202-48846353 Brachypodium distachyon
Bradi2g48890 0.5kb upstream 0.5kb upstream 500 false Bd2: 48843202-48843701 Brachypodium distachyon
Bradi2g48890 0.5kb downstream 0.5kb downstream 3152 true Bd2: 48843702-48846853 Brachypodium distachyon
Bradi2g48890 0.5kb downstream 0.5kb downstream 500 false Bd2: 48846354-48846853 Brachypodium distachyon
Bradi2g48890 1.0kb upstream 1.0kb upstream 3652 true Bd2: 48842702-48846353 Brachypodium distachyon
Bradi2g48890 1.0kb upstream 1.0kb upstream 1000 false Bd2: 48842702-48843701 Brachypodium distachyon
Bradi2g48890 1.0kb downstream 1.0kb downstream 3652 true Bd2: 48843702-48847353 Brachypodium distachyon
Bradi2g48890 1.0kb downstream 1.0kb downstream 1000 false Bd2: 48846354-48847353 Brachypodium distachyon
Bradi2g48890 2.0kb upstream 2.0kb upstream 4652 true Bd2: 48841702-48846353 Brachypodium distachyon
Bradi2g48890 2.0kb upstream 2.0kb upstream 2000 false Bd2: 48841702-48843701 Brachypodium distachyon
Bradi2g48890 2.0kb downstream 2.0kb downstream 4652 true Bd2: 48843702-48848353 Brachypodium distachyon
Bradi2g48890 2.0kb downstream 2.0kb downstream 2000 false Bd2: 48846354-48848353 Brachypodium distachyon
Bradi2g48890 5.0kb upstream 5.0kb upstream 7652 true Bd2: 48838702-48846353 Brachypodium distachyon
Bradi2g48890 5.0kb upstream 5.0kb upstream 5000 false Bd2: 48838702-48843701 Brachypodium distachyon
Bradi2g48890 5.0kb downstream 5.0kb downstream 7652 true Bd2: 48843702-48851353 Brachypodium distachyon
Bradi2g48890 5.0kb downstream 5.0kb downstream 5000 false Bd2: 48846354-48851353 Brachypodium distachyon
Bradi2g48890 10.0kb upstream 10.0kb upstream 12652 true Bd2: 48833702-48846353 Brachypodium distachyon
Bradi2g48890 10.0kb upstream 10.0kb upstream 10000 false Bd2: 48833702-48843701 Brachypodium distachyon
Bradi2g48890 10.0kb downstream 10.0kb downstream 12652 true Bd2: 48843702-48856353 Brachypodium distachyon
Bradi2g48890 10.0kb downstream 10.0kb downstream 10000 false Bd2: 48846354-48856353 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575882 5269 Grass View MSA
122045316 5273 Angiosperm View MSA
121346965 5274 Embryophyte View MSA
123428421 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.672     High  
cufflinks 12.549     High  
cufflinks 4.03        
cufflinks 5.673        
cufflinks 12.743     High  
cufflinks 25.432     High  
cufflinks 20.443     High  
cufflinks 13.083     High  
cufflinks 21.876     High  
cufflinks 15.487     High  
cufflinks 47.88     High High
cufflinks 21.175     High  
cufflinks 35.8     High  
cufflinks 48.677     High High
cufflinks 18.805     High  
cufflinks 23.246     High  
cufflinks 16.837     High  
cufflinks 0.161       Low
cufflinks 7.286        
cufflinks 7.881        
cufflinks 6.795        
cufflinks 15.913     High  
cufflinks 13.59     High  
cufflinks 22.396     High  
cufflinks 24.84     High  
cufflinks 5.609        
cufflinks 54.015     High High
cufflinks 9.249        
cufflinks 13.232     High  
cufflinks 3.038       Low

0 Strain