Gene : Bradi2g48840 B. distachyon v3.1
Genomic Order:  5867 Name:  ? Bradi2g48840
Secondary Identifier:  ? PAC:32778621
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g48840 0.5kb upstream 0.5kb upstream 806 true Bd2: 48806919-48807724 Brachypodium distachyon
Bradi2g48840 0.5kb upstream 0.5kb upstream 500 false Bd2: 48807225-48807724 Brachypodium distachyon
Bradi2g48840 0.5kb downstream 0.5kb downstream 806 true Bd2: 48806419-48807224 Brachypodium distachyon
Bradi2g48840 0.5kb downstream 0.5kb downstream 500 false Bd2: 48806419-48806918 Brachypodium distachyon
Bradi2g48840 1.0kb upstream 1.0kb upstream 1306 true Bd2: 48806919-48808224 Brachypodium distachyon
Bradi2g48840 1.0kb upstream 1.0kb upstream 1000 false Bd2: 48807225-48808224 Brachypodium distachyon
Bradi2g48840 1.0kb downstream 1.0kb downstream 1306 true Bd2: 48805919-48807224 Brachypodium distachyon
Bradi2g48840 1.0kb downstream 1.0kb downstream 1000 false Bd2: 48805919-48806918 Brachypodium distachyon
Bradi2g48840 2.0kb upstream 2.0kb upstream 2306 true Bd2: 48806919-48809224 Brachypodium distachyon
Bradi2g48840 2.0kb upstream 2.0kb upstream 2000 false Bd2: 48807225-48809224 Brachypodium distachyon
Bradi2g48840 2.0kb downstream 2.0kb downstream 2306 true Bd2: 48804919-48807224 Brachypodium distachyon
Bradi2g48840 2.0kb downstream 2.0kb downstream 2000 false Bd2: 48804919-48806918 Brachypodium distachyon
Bradi2g48840 5.0kb upstream 5.0kb upstream 5306 true Bd2: 48806919-48812224 Brachypodium distachyon
Bradi2g48840 5.0kb upstream 5.0kb upstream 5000 false Bd2: 48807225-48812224 Brachypodium distachyon
Bradi2g48840 5.0kb downstream 5.0kb downstream 5306 true Bd2: 48801919-48807224 Brachypodium distachyon
Bradi2g48840 5.0kb downstream 5.0kb downstream 5000 false Bd2: 48801919-48806918 Brachypodium distachyon
Bradi2g48840 10.0kb upstream 10.0kb upstream 10306 true Bd2: 48806919-48817224 Brachypodium distachyon
Bradi2g48840 10.0kb upstream 10.0kb upstream 10000 false Bd2: 48807225-48817224 Brachypodium distachyon
Bradi2g48840 10.0kb downstream 10.0kb downstream 10306 true Bd2: 48796919-48807224 Brachypodium distachyon
Bradi2g48840 10.0kb downstream 10.0kb downstream 10000 false Bd2: 48796919-48806918 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124581552 5269 Grass View MSA
122048544 5273 Angiosperm View MSA
121311015 5274 Embryophyte View MSA
123348373 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.496     High  
cufflinks 25.153     High  
cufflinks 26.329     High  
cufflinks 26.509     High  
cufflinks 33.913     High  
cufflinks 19.13     High  
cufflinks 34.266     High  
cufflinks 20.324     High  
cufflinks 15.905     High  
cufflinks 56.826     High  
cufflinks 9.378     High Low
cufflinks 11.949     High Low
cufflinks 8.602     High Low
cufflinks 6.699       Low
cufflinks 15.39     High  
cufflinks 21.195     High  
cufflinks 40.429     High  
cufflinks 29.93     High  
cufflinks 96.629     High High
cufflinks 51.306     High  
cufflinks 119.296     High High
cufflinks 21.037     High  
cufflinks 21.443     High  
cufflinks 20.586     High  
cufflinks 28.473     High  
cufflinks 40.665     High  
cufflinks 11.89     High Low
cufflinks 55.73     High  
cufflinks 46.166     High  
cufflinks 39.81     High  

0 Strain