Gene : Bradi4g06146 B. distachyon v3.1
Defline:  (1 of 56) PF03101//PF10551 - FAR1 DNA-binding domain (FAR1) // MULE transposase domain (MULE) Genomic Order:  800
Name:  ? Bradi4g06146 Secondary Identifier:  ? PAC:32789404
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g06146 0.5kb upstream 0.5kb upstream 3381 true Bd4: 5120736-5124116 Brachypodium distachyon
Bradi4g06146 0.5kb upstream 0.5kb upstream 500 false Bd4: 5123617-5124116 Brachypodium distachyon
Bradi4g06146 0.5kb downstream 0.5kb downstream 3381 true Bd4: 5120236-5123616 Brachypodium distachyon
Bradi4g06146 0.5kb downstream 0.5kb downstream 500 false Bd4: 5120236-5120735 Brachypodium distachyon
Bradi4g06146 1.0kb upstream 1.0kb upstream 3881 true Bd4: 5120736-5124616 Brachypodium distachyon
Bradi4g06146 1.0kb upstream 1.0kb upstream 1000 false Bd4: 5123617-5124616 Brachypodium distachyon
Bradi4g06146 1.0kb downstream 1.0kb downstream 3881 true Bd4: 5119736-5123616 Brachypodium distachyon
Bradi4g06146 1.0kb downstream 1.0kb downstream 1000 false Bd4: 5119736-5120735 Brachypodium distachyon
Bradi4g06146 2.0kb upstream 2.0kb upstream 4881 true Bd4: 5120736-5125616 Brachypodium distachyon
Bradi4g06146 2.0kb upstream 2.0kb upstream 2000 false Bd4: 5123617-5125616 Brachypodium distachyon
Bradi4g06146 2.0kb downstream 2.0kb downstream 4881 true Bd4: 5118736-5123616 Brachypodium distachyon
Bradi4g06146 2.0kb downstream 2.0kb downstream 2000 false Bd4: 5118736-5120735 Brachypodium distachyon
Bradi4g06146 5.0kb upstream 5.0kb upstream 7881 true Bd4: 5120736-5128616 Brachypodium distachyon
Bradi4g06146 5.0kb upstream 5.0kb upstream 5000 false Bd4: 5123617-5128616 Brachypodium distachyon
Bradi4g06146 5.0kb downstream 5.0kb downstream 7881 true Bd4: 5115736-5123616 Brachypodium distachyon
Bradi4g06146 5.0kb downstream 5.0kb downstream 5000 false Bd4: 5115736-5120735 Brachypodium distachyon
Bradi4g06146 10.0kb upstream 10.0kb upstream 12881 true Bd4: 5120736-5133616 Brachypodium distachyon
Bradi4g06146 10.0kb upstream 10.0kb upstream 10000 false Bd4: 5123617-5133616 Brachypodium distachyon
Bradi4g06146 10.0kb downstream 10.0kb downstream 12881 true Bd4: 5110736-5123616 Brachypodium distachyon
Bradi4g06146 10.0kb downstream 10.0kb downstream 10000 false Bd4: 5110736-5120735 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031606 5273 Angiosperm View MSA
124589040 5269 Grass View MSA
121300621 5274 Embryophyte View MSA
123338368 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain