Gene : Bradi2g49200 B. distachyon v3.1
Defline:  (1 of 1) K05954 - protein farnesyltransferase subunit beta (FNTB) Genomic Order:  5909
Name:  ? Bradi2g49200 Secondary Identifier:  ? PAC:32779320
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g49200 0.5kb upstream 0.5kb upstream 6058 true Bd2: 49094704-49100761 Brachypodium distachyon
Bradi2g49200 0.5kb upstream 0.5kb upstream 500 false Bd2: 49100262-49100761 Brachypodium distachyon
Bradi2g49200 0.5kb downstream 0.5kb downstream 6058 true Bd2: 49094204-49100261 Brachypodium distachyon
Bradi2g49200 0.5kb downstream 0.5kb downstream 500 false Bd2: 49094204-49094703 Brachypodium distachyon
Bradi2g49200 1.0kb upstream 1.0kb upstream 6558 true Bd2: 49094704-49101261 Brachypodium distachyon
Bradi2g49200 1.0kb upstream 1.0kb upstream 1000 false Bd2: 49100262-49101261 Brachypodium distachyon
Bradi2g49200 1.0kb downstream 1.0kb downstream 6558 true Bd2: 49093704-49100261 Brachypodium distachyon
Bradi2g49200 1.0kb downstream 1.0kb downstream 1000 false Bd2: 49093704-49094703 Brachypodium distachyon
Bradi2g49200 2.0kb upstream 2.0kb upstream 7558 true Bd2: 49094704-49102261 Brachypodium distachyon
Bradi2g49200 2.0kb upstream 2.0kb upstream 2000 false Bd2: 49100262-49102261 Brachypodium distachyon
Bradi2g49200 2.0kb downstream 2.0kb downstream 7558 true Bd2: 49092704-49100261 Brachypodium distachyon
Bradi2g49200 2.0kb downstream 2.0kb downstream 2000 false Bd2: 49092704-49094703 Brachypodium distachyon
Bradi2g49200 5.0kb upstream 5.0kb upstream 10558 true Bd2: 49094704-49105261 Brachypodium distachyon
Bradi2g49200 5.0kb upstream 5.0kb upstream 5000 false Bd2: 49100262-49105261 Brachypodium distachyon
Bradi2g49200 5.0kb downstream 5.0kb downstream 10558 true Bd2: 49089704-49100261 Brachypodium distachyon
Bradi2g49200 5.0kb downstream 5.0kb downstream 5000 false Bd2: 49089704-49094703 Brachypodium distachyon
Bradi2g49200 10.0kb upstream 10.0kb upstream 15558 true Bd2: 49094704-49110261 Brachypodium distachyon
Bradi2g49200 10.0kb upstream 10.0kb upstream 10000 false Bd2: 49100262-49110261 Brachypodium distachyon
Bradi2g49200 10.0kb downstream 10.0kb downstream 15558 true Bd2: 49084704-49100261 Brachypodium distachyon
Bradi2g49200 10.0kb downstream 10.0kb downstream 10000 false Bd2: 49084704-49094703 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577131 5269 Grass View MSA
122048431 5273 Angiosperm View MSA
123428886 5275 Viridiplantae View MSA
121348360 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.25        
cufflinks 1.345        
cufflinks 1.399        
cufflinks 1.683        
cufflinks 0.843       Low
cufflinks 1.171        
cufflinks 1.277        
cufflinks 1.104        
cufflinks 1.145        
cufflinks 1.487        
cufflinks 1.168        
cufflinks 0.88       Low
cufflinks 0.644       Low
cufflinks 0.99        
cufflinks 0.808       Low
cufflinks 1.119        
cufflinks 1.452        
cufflinks 2.057       High
cufflinks 2.003       High
cufflinks 1.391        
cufflinks 1.746       High
cufflinks 1.444        
cufflinks 1.127        
cufflinks 1.159        
cufflinks 1.417        
cufflinks 1.508        
cufflinks 1.266        
cufflinks 1.706       High
cufflinks 1.45        
cufflinks 1.133        

0 Strain